G1278229


Basic Information

Item Value
gene id G1278229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29683604 ~ 29684155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459813
cccaaactgttgaacggtagtatacgtatcaaaagtaaaagtataaatcatttcaaattgcttatattaaaCAAAGCATACGGCACAAATGTTTTTGTtaatttactgatagccaggggcacactccaacacagacataatttactgatagccaggggcacactccaacacagacataatttactgatagccaggggcacactccaacacagacataatttactgatagccaggggcacactccaacacagacataatttactgatagccaggggcacactccaacacagacataatttactgatagccaggggcacactccaacacagacataatttactgatagccaggggcacactccaacacagacataatttactgatagccaggggcacactccaacacagacataacttacaaacaaagcatttgtgtttagtgagtcctccaggtcagcggcagtagggatgaccagggatgttctcttgataagtatgtgaattggaccatttt

Function

NR:

description
PREDICTED: serine palmitoyltransferase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459813 True 513 lncRNA 0.42 2 29683604 29684155

Neighbor

gene id symbol gene type direction distance location
ackr4b LOC106590119 coding upstream 18683 29657968 ~ 29664921 (+)
si:dkey-12l12.1 LOC106590121 coding upstream 50785 29604542 ~ 29632819 (+)
LOC110489961 LOC106590122 coding upstream 69086 29612631 ~ 29614518 (+)
prlh2 crfa coding upstream 256786 29422394 ~ 29426818 (+)
zfand1 zfand1 coding upstream 268499 29405296 ~ 29415105 (+)
LOC110489968 LOC106590118 coding downstream 5562 29689717 ~ 29695951 (+)
tgif1 LOC106590112 coding downstream 285789 29969944 ~ 29976086 (+)
LOC110489977 LOC106590110 coding downstream 645655 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 711662 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 797862 30482017 ~ 30496207 (+)
G1278205 NA non-coding upstream 33036 29650333 ~ 29650568 (+)
G1278201 NA non-coding upstream 38563 29644800 ~ 29645041 (+)
G1278188 NA non-coding upstream 60931 29622195 ~ 29622673 (+)
G1278187 NA non-coding upstream 62792 29620489 ~ 29620812 (+)
G1278186 NA non-coding upstream 63904 29619481 ~ 29619700 (+)
G1278230 NA non-coding downstream 1119 29685274 ~ 29685579 (+)
G1278231 NA non-coding downstream 3066 29687221 ~ 29687582 (+)
G1278232 NA non-coding downstream 3770 29687925 ~ 29690069 (+)
G1278247 NA non-coding downstream 29394 29713549 ~ 29713875 (+)
G1278249 nphp3 non-coding downstream 31252 29715407 ~ 29715990 (+)
G1277279 NA other upstream 867794 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1059386 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1427198 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1829591 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2581577 27101309 ~ 27102027 (+)
G1279349 NA other downstream 618878 30303033 ~ 30303419 (+)
G1279833 NA other downstream 1260016 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2312012 31996167 ~ 31996513 (+)
G1282302 NA other downstream 3003403 32687558 ~ 32698036 (+)

Expression


Co-expression Network