G1278232


Basic Information

Item Value
gene id G1278232
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29687925 ~ 29690069 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459816
ctccggtaccgcttgccgtgcggtagcagaaagaatagtctatgacttgggtgactggagtccaaTTTTTTGCGTCTTCCTTACCGCTGATCACACGTAAACACAGGTCAGTTTCATAGCAGCCACTTTGTACTGCTTGTCACCTCtatgtgctctcctcctctcacctcttcccttggcttgtggacttcaatgcacaacacatcagctgtatgtgaccaggcgaagaaaataaaaaaatccaagccaaaccgctacacacagcctagaTCGTTGTCACCATATCAGCTAAAGTAATGTCACAGTCAGCCTAGATAATAGAACTAATGTgatagtaaacccactacaatcatgcagtaacgttacagtgtagtcagtaagcagttacaccggcaggccccggtggcaatacatttgtgataccaaaagcttaccttgacttggaagagttccagtgttgtgttggaaagtcatagccagctagcaccCCTCTGTTTGTGAAGgctgtttcagtaggctaaagtagctagct

Function

NR:

description
abl interactor 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459816 True 532 lncRNA 0.46 2 29687925 29690069

Neighbor

gene id symbol gene type direction distance location
ackr4b LOC106590119 coding upstream 23004 29657968 ~ 29664921 (+)
si:dkey-12l12.1 LOC106590121 coding upstream 55106 29604542 ~ 29632819 (+)
LOC110489961 LOC106590122 coding upstream 73407 29612631 ~ 29614518 (+)
prlh2 crfa coding upstream 261107 29422394 ~ 29426818 (+)
zfand1 zfand1 coding upstream 272820 29405296 ~ 29415105 (+)
tgif1 LOC106590112 coding downstream 279875 29969944 ~ 29976086 (+)
LOC110489977 LOC106590110 coding downstream 639741 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 705748 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 791948 30482017 ~ 30496207 (+)
en2a en2 coding downstream 827927 30517996 ~ 30521339 (+)
G1278231 NA non-coding upstream 343 29687221 ~ 29687582 (+)
G1278230 NA non-coding upstream 2346 29685274 ~ 29685579 (+)
G1278229 NA non-coding upstream 3770 29683604 ~ 29684155 (+)
G1278205 NA non-coding upstream 37357 29650333 ~ 29650568 (+)
G1278201 NA non-coding upstream 42884 29644800 ~ 29645041 (+)
G1278247 NA non-coding downstream 23480 29713549 ~ 29713875 (+)
G1278249 nphp3 non-coding downstream 25338 29715407 ~ 29715990 (+)
G1278256 NA non-coding downstream 32849 29722918 ~ 29723134 (+)
G1278257 NA non-coding downstream 36581 29726650 ~ 29744230 (+)
G1278309 NA non-coding downstream 129308 29819377 ~ 29819722 (+)
G1277279 NA other upstream 872115 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1063707 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1431519 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1833912 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2585898 27101309 ~ 27102027 (+)
G1279349 NA other downstream 612964 30303033 ~ 30303419 (+)
G1279833 NA other downstream 1254102 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2306098 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2997489 32687558 ~ 32698036 (+)

Expression


Co-expression Network