G1278257


Basic Information

Item Value
gene id G1278257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29726650 ~ 29744230 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459841
GCCTTCCTGTAGCAAATATAGCCTTCCTGTCACTCAAACAGATCTAACCGTTTCAAAAACAGAATAGGGTGGTTATCTGTAGAGAACTAAATGAGAACTACGAGAGGAACTGATTCAAAATGGGGGTTATTTGAGTGATACGAGACATGTACATTGTGTATGACAGAGATGACGTGCaatgtatgtatgtgtaacacacacacacacacatacacacacgctgaGTTTTGTGTTTCTTAGCCAATCCAGATAGAGGGGGTTGAAAATGAGCTGATAGTTGAATAAATGAGAAGCAACACTTGACAGCTGATATCAAATTGATAACCAATAAGAGTAGATAGGGGCTCCCCGGGTAATGTTTACCCtcggtacagatctag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459841 True 380 lncRNA 0.41 2 29726650 29744230

Neighbor

gene id symbol gene type direction distance location
LOC110489968 LOC106590118 coding upstream 30699 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 61729 29657968 ~ 29664921 (+)
si:dkey-12l12.1 LOC106590121 coding upstream 93831 29604542 ~ 29632819 (+)
LOC110489961 LOC106590122 coding upstream 112132 29612631 ~ 29614518 (+)
prlh2 crfa coding upstream 299832 29422394 ~ 29426818 (+)
tgif1 LOC106590112 coding downstream 225714 29969944 ~ 29976086 (+)
LOC110489977 LOC106590110 coding downstream 585580 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 651587 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 737787 30482017 ~ 30496207 (+)
en2a en2 coding downstream 773766 30517996 ~ 30521339 (+)
G1278256 NA non-coding upstream 3516 29722918 ~ 29723134 (+)
G1278249 nphp3 non-coding upstream 10660 29715407 ~ 29715990 (+)
G1278247 NA non-coding upstream 12775 29713549 ~ 29713875 (+)
G1278232 NA non-coding upstream 36581 29687925 ~ 29690069 (+)
G1278231 NA non-coding upstream 39068 29687221 ~ 29687582 (+)
G1278309 NA non-coding downstream 75147 29819377 ~ 29819722 (+)
G1278310 NA non-coding downstream 75609 29819839 ~ 29820060 (+)
G1278313 NA non-coding downstream 80333 29824563 ~ 29824957 (+)
G1278316 NA non-coding downstream 86737 29830967 ~ 29831262 (+)
G1278317 NA non-coding downstream 88630 29832860 ~ 29833077 (+)
G1277279 NA other upstream 910840 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1102432 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1470244 28190186 ~ 28256406 (+)
G1276288 NA other upstream 1872637 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2624623 27101309 ~ 27102027 (+)
G1279349 NA other downstream 558803 30303033 ~ 30303419 (+)
G1279833 NA other downstream 1199941 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2251937 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2943328 32687558 ~ 32698036 (+)

Expression


Co-expression Network