G1278363


Basic Information

Item Value
gene id G1278363
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29894488 ~ 29894736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459950
ttaagcctgatgaatttactatgttaaatgaggcctcacctcctggttagactagtgaccatatcccctgtgcatcccgcaatggtggaggtgttgctaacatttacgatggcaaatttcaatttacacaaaaacaaaaattacatttttgtcttttgagcttctagtcatgaaatcaatgctgcctactcaatcactttttaaagctactgtttacaggcctcctgggccatatacaacGTTCCTCAC

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459950 True 249 lncRNA 0.40 1 29894488 29894736

Neighbor

gene id symbol gene type direction distance location
LOC110489968 LOC106590118 coding upstream 198537 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 229567 29657968 ~ 29664921 (+)
si:dkey-12l12.1 LOC106590121 coding upstream 261669 29604542 ~ 29632819 (+)
LOC110489961 LOC106590122 coding upstream 279970 29612631 ~ 29614518 (+)
prlh2 crfa coding upstream 467670 29422394 ~ 29426818 (+)
tgif1 LOC106590112 coding downstream 75208 29969944 ~ 29976086 (+)
LOC110489977 LOC106590110 coding downstream 435074 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 501081 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 587281 30482017 ~ 30496207 (+)
en2a en2 coding downstream 623260 30517996 ~ 30521339 (+)
G1278351 NA non-coding upstream 18168 29875973 ~ 29876320 (+)
G1278343 NA non-coding upstream 27892 29866396 ~ 29866596 (+)
G1278335 NA non-coding upstream 37561 29856703 ~ 29856927 (+)
G1278332 NA non-coding upstream 40828 29853454 ~ 29853660 (+)
G1278326 NA non-coding upstream 46714 29847429 ~ 29847774 (+)
G1278365 NA non-coding downstream 2398 29897134 ~ 29897497 (+)
G1278369 NA non-coding downstream 13222 29907958 ~ 29908186 (+)
G1278389 NA non-coding downstream 31435 29926171 ~ 29926444 (+)
G1278396 NA non-coding downstream 37743 29932479 ~ 29932708 (+)
G1278372 NA non-coding downstream 44360 29939096 ~ 29981295 (+)
G1277279 NA other upstream 1078678 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1270270 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1638082 28190186 ~ 28256406 (+)
G1276288 NA other upstream 2040475 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2792461 27101309 ~ 27102027 (+)
G1279349 NA other downstream 408297 30303033 ~ 30303419 (+)
G1279833 NA other downstream 1049435 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2101431 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2792822 32687558 ~ 32698036 (+)

Expression


Co-expression Network