G1278365


Basic Information

Item Value
gene id G1278365
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29897134 ~ 29897497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459952
gtcccagatctgctgttttcaactttctagagacagcaggagcggtagagatactcttaatgatcggctatgaaaagccaactgacatttactcctgaggtgctgacttgctgcaccctcgacaactactgtgattattattatttgaccatgctggtcatttatgaacatttgaacatcttggtcatgttctgttataatttctacccggcacagccagaaaaggactggccacccctcaaagcctggttcctctctaggttttggcctttctaggaggtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459952 True 364 lncRNA 0.45 1 29897134 29897497

Neighbor

gene id symbol gene type direction distance location
LOC110489968 LOC106590118 coding upstream 201183 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 232213 29657968 ~ 29664921 (+)
si:dkey-12l12.1 LOC106590121 coding upstream 264315 29604542 ~ 29632819 (+)
LOC110489961 LOC106590122 coding upstream 282616 29612631 ~ 29614518 (+)
prlh2 crfa coding upstream 470316 29422394 ~ 29426818 (+)
tgif1 LOC106590112 coding downstream 72447 29969944 ~ 29976086 (+)
LOC110489977 LOC106590110 coding downstream 432313 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 498320 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 584520 30482017 ~ 30496207 (+)
en2a en2 coding downstream 620499 30517996 ~ 30521339 (+)
G1278363 NA non-coding upstream 2398 29894488 ~ 29894736 (+)
G1278351 NA non-coding upstream 20814 29875973 ~ 29876320 (+)
G1278343 NA non-coding upstream 30538 29866396 ~ 29866596 (+)
G1278335 NA non-coding upstream 40207 29856703 ~ 29856927 (+)
G1278332 NA non-coding upstream 43474 29853454 ~ 29853660 (+)
G1278369 NA non-coding downstream 10461 29907958 ~ 29908186 (+)
G1278389 NA non-coding downstream 28674 29926171 ~ 29926444 (+)
G1278396 NA non-coding downstream 34982 29932479 ~ 29932708 (+)
G1278372 NA non-coding downstream 41599 29939096 ~ 29981295 (+)
G1278401 LOC106590113 non-coding downstream 51261 29948758 ~ 29965665 (+)
G1277279 NA other upstream 1081324 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1272916 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1640728 28190186 ~ 28256406 (+)
G1276288 NA other upstream 2043121 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2795107 27101309 ~ 27102027 (+)
G1279349 NA other downstream 405536 30303033 ~ 30303419 (+)
G1279833 NA other downstream 1046674 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2098670 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2790061 32687558 ~ 32698036 (+)

Expression


Co-expression Network