G1278369


Basic Information

Item Value
gene id G1278369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29907958 ~ 29908186 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459956
TTCCTGCTCACCACTCCATCGACGGATTCACCTCAaactcccatccctctctctcccactttccttctcctttctctctctccttccctcgttCACACTGTCCCTCCAGCTCAGTTTCACTCCTCCTCATGCGTGAGAAAAGACGATGTCCTGACAATGGAAGCagtcagaatacacacacacacacacacacacacacacatattctcacacacactctaacatATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459956 True 229 lncRNA 0.49 1 29907958 29908186

Neighbor

gene id symbol gene type direction distance location
LOC110489968 LOC106590118 coding upstream 212007 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 243037 29657968 ~ 29664921 (+)
si:dkey-12l12.1 LOC106590121 coding upstream 275139 29604542 ~ 29632819 (+)
LOC110489961 LOC106590122 coding upstream 293440 29612631 ~ 29614518 (+)
prlh2 crfa coding upstream 481140 29422394 ~ 29426818 (+)
tgif1 LOC106590112 coding downstream 61758 29969944 ~ 29976086 (+)
LOC110489977 LOC106590110 coding downstream 421624 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 487631 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 573831 30482017 ~ 30496207 (+)
en2a en2 coding downstream 609810 30517996 ~ 30521339 (+)
G1278365 NA non-coding upstream 10461 29897134 ~ 29897497 (+)
G1278363 NA non-coding upstream 13222 29894488 ~ 29894736 (+)
G1278351 NA non-coding upstream 31638 29875973 ~ 29876320 (+)
G1278343 NA non-coding upstream 41362 29866396 ~ 29866596 (+)
G1278335 NA non-coding upstream 51031 29856703 ~ 29856927 (+)
G1278389 NA non-coding downstream 17985 29926171 ~ 29926444 (+)
G1278396 NA non-coding downstream 24293 29932479 ~ 29932708 (+)
G1278372 NA non-coding downstream 30910 29939096 ~ 29981295 (+)
G1278401 LOC106590113 non-coding downstream 40572 29948758 ~ 29965665 (+)
G1278371 NA non-coding downstream 69145 29977331 ~ 29979103 (+)
G1277279 NA other upstream 1092148 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1283740 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1651552 28190186 ~ 28256406 (+)
G1276288 NA other upstream 2053945 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2805931 27101309 ~ 27102027 (+)
G1279349 NA other downstream 394847 30303033 ~ 30303419 (+)
G1279833 NA other downstream 1035985 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2087981 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2779372 32687558 ~ 32698036 (+)

Expression


Co-expression Network