G1278389


Basic Information

Item Value
gene id G1278389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 29926171 ~ 29926444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1459976
ccaatttgatgcagtgtacggcgtatggtctgagcactgacaggctgaccccccaccccttcaacctctgcagcaatgctggcagcactcatacatctatttcccaaagacaacctctggatatgacgctgagcacgtgctctcaacttctttggtcgaccatggcgaggcctgttctgagtggaacctgtccagttaaaccgctgtatggtcttggccaccgtgctgcagctcagtttcagggtcttggcaatcttcttatagcccaggccat

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1459976 True 274 lncRNA 0.53 1 29926171 29926444

Neighbor

gene id symbol gene type direction distance location
LOC110489968 LOC106590118 coding upstream 230220 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 261250 29657968 ~ 29664921 (+)
si:dkey-12l12.1 LOC106590121 coding upstream 293352 29604542 ~ 29632819 (+)
LOC110489961 LOC106590122 coding upstream 311653 29612631 ~ 29614518 (+)
prlh2 crfa coding upstream 499353 29422394 ~ 29426818 (+)
tgif1 LOC106590112 coding downstream 43500 29969944 ~ 29976086 (+)
LOC110489977 LOC106590110 coding downstream 403366 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 469373 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 555573 30482017 ~ 30496207 (+)
en2a en2 coding downstream 591552 30517996 ~ 30521339 (+)
G1278369 NA non-coding upstream 17985 29907958 ~ 29908186 (+)
G1278365 NA non-coding upstream 28674 29897134 ~ 29897497 (+)
G1278363 NA non-coding upstream 31435 29894488 ~ 29894736 (+)
G1278351 NA non-coding upstream 49851 29875973 ~ 29876320 (+)
G1278343 NA non-coding upstream 59575 29866396 ~ 29866596 (+)
G1278396 NA non-coding downstream 6035 29932479 ~ 29932708 (+)
G1278372 NA non-coding downstream 12652 29939096 ~ 29981295 (+)
G1278401 LOC106590113 non-coding downstream 22314 29948758 ~ 29965665 (+)
G1278371 NA non-coding downstream 50887 29977331 ~ 29979103 (+)
G1278468 NA non-coding downstream 130057 30056501 ~ 30069993 (+)
G1277279 NA other upstream 1110361 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1301953 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1669765 28190186 ~ 28256406 (+)
G1276288 NA other upstream 2072158 27853618 ~ 27854013 (+)
G1275572 NA other upstream 2824144 27101309 ~ 27102027 (+)
G1279349 NA other downstream 376589 30303033 ~ 30303419 (+)
G1279833 NA other downstream 1017727 30944171 ~ 30947330 (+)
G1281462 NA other downstream 2069723 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2761114 32687558 ~ 32698036 (+)

Expression


Co-expression Network