G1278514


Basic Information

Item Value
gene id G1278514
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30112319 ~ 30114236 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1460109
GCTCAGACGAGGCTGGTGGTTCCTGGTCCTCTGGCTGATGCCGTCCCCAATGACATCCCTCAGCCTCCCTTGGACATTGAGGGGAGCTCTGTCTATGCTATCAGATCACTCCTGGACTAGTGGTCTGGGAGGGGTAAGATCCAGAGGAGCAGTGTTGGGTTCCGGTGGATGACATTCTAGATCCCAACATCATCCAAGAATTCCACCTCGGGTCCGTCCTCCTGGCCGTCGTCGTCCTCTCCAGTACTCGACGTCGCAGGTTTACTAACCACCTGTCCTGGCAAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1460109 True 285 lncRNA 0.57 2 30112319 30114236

Neighbor

gene id symbol gene type direction distance location
tgif1 LOC106590112 coding upstream 136233 29969944 ~ 29976086 (+)
LOC110489968 LOC106590118 coding upstream 416368 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 447398 29657968 ~ 29664921 (+)
si:dkey-12l12.1 LOC106590121 coding upstream 479500 29604542 ~ 29632819 (+)
LOC110489977 LOC106590110 coding downstream 215574 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 281581 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 367781 30482017 ~ 30496207 (+)
en2a en2 coding downstream 403760 30517996 ~ 30521339 (+)
LOC118938958 NA coding downstream 418860 30533096 ~ 30533257 (+)
G1278468 NA non-coding upstream 42326 30056501 ~ 30069993 (+)
G1278471 NA non-coding upstream 52350 30059551 ~ 30059969 (+)
G1278372 NA non-coding upstream 131024 29939096 ~ 29981295 (+)
G1278371 NA non-coding upstream 133216 29977331 ~ 29979103 (+)
G1278401 LOC106590113 non-coding upstream 146654 29948758 ~ 29965665 (+)
G1279348 NA non-coding downstream 188436 30302672 ~ 30302880 (+)
G1279379 NA non-coding downstream 236256 30350492 ~ 30352896 (+)
G1279395 NA non-coding downstream 259791 30374027 ~ 30374269 (+)
G1279404 NA non-coding downstream 272641 30386877 ~ 30387089 (+)
G1279449 NA non-coding downstream 280977 30395213 ~ 30395447 (+)
G1277279 NA other upstream 1296509 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1488101 28574316 ~ 28624218 (+)
G1276733 NA other upstream 1855913 28190186 ~ 28256406 (+)
G1276288 NA other upstream 2258306 27853618 ~ 27854013 (+)
G1275572 NA other upstream 3010292 27101309 ~ 27102027 (+)
G1279349 NA other downstream 188797 30303033 ~ 30303419 (+)
G1279833 NA other downstream 829935 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1881931 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2573322 32687558 ~ 32698036 (+)

Expression


Co-expression Network