G1279348


Basic Information

Item Value
gene id G1279348
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30302672 ~ 30302880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1460984
gattccggcagcgccggacggacgggagactccggcagtgcccggacaggcgggagactccggcagctccggagtgaagggcgattctggcatcgcctggctgactgacggctctggcagctcctggctgactgacgtctctggcaggtcctggctgactgatggctctggcagctcctggctgactgtcGGCACTGGCATCTCCTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1460984 True 209 lncRNA 0.67 1 30302672 30302880

Neighbor

gene id symbol gene type direction distance location
tgif1 LOC106590112 coding upstream 326586 29969944 ~ 29976086 (+)
LOC110489968 LOC106590118 coding upstream 606721 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 637751 29657968 ~ 29664921 (+)
si:dkey-12l12.1 LOC106590121 coding upstream 669853 29604542 ~ 29632819 (+)
LOC110489977 LOC106590110 coding downstream 26930 30329810 ~ 30345566 (+)
htr5ab htr5a coding downstream 92937 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 179137 30482017 ~ 30496207 (+)
en2a en2 coding downstream 215116 30517996 ~ 30521339 (+)
LOC118938958 NA coding downstream 230216 30533096 ~ 30533257 (+)
G1278514 NA non-coding upstream 188436 30112319 ~ 30114236 (+)
G1278468 NA non-coding upstream 232679 30056501 ~ 30069993 (+)
G1278471 NA non-coding upstream 242703 30059551 ~ 30059969 (+)
G1278372 NA non-coding upstream 321377 29939096 ~ 29981295 (+)
G1278371 NA non-coding upstream 323569 29977331 ~ 29979103 (+)
G1279379 NA non-coding downstream 47612 30350492 ~ 30352896 (+)
G1279395 NA non-coding downstream 71147 30374027 ~ 30374269 (+)
G1279404 NA non-coding downstream 83997 30386877 ~ 30387089 (+)
G1279449 NA non-coding downstream 92333 30395213 ~ 30395447 (+)
G1279459 NA non-coding downstream 108486 30411366 ~ 30411598 (+)
G1277279 NA other upstream 1486862 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1678454 28574316 ~ 28624218 (+)
G1276733 NA other upstream 2046266 28190186 ~ 28256406 (+)
G1276288 NA other upstream 2448659 27853618 ~ 27854013 (+)
G1275572 NA other upstream 3200645 27101309 ~ 27102027 (+)
G1279349 NA other downstream 153 30303033 ~ 30303419 (+)
G1279833 NA other downstream 641291 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1693287 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2384678 32687558 ~ 32698036 (+)

Expression


Co-expression Network