XLOC_031880


Basic Information

Item Value
gene id XLOC_031880
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 10720042 ~ 10722088 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064817
ttttttttaTTTATGAAGTCAAAGGAAGGTTTCCGCCTTTAATTGTGTTCCatttggagaagaaaaaaaaacaaaagagttGTACAAAAGTAACATCAAATTTTACACGTTTAAAAAGTAATCGAAACGAGGAGTCTTTGATACGACAGAATCATTATTAGACTACATAAATTGTGGCTATAAACAGCTTGGGGGCTGAAGAAAAACGAAAAGAAGATACATTATGAATGTTACAGGGATAATCTGAACAGCGATAAGGATGATGATACAAGAAAAAGAAAGTTTATTACACGATTGTTTGACTCCGTCACCTGATGTCTTGCATGTGAGTAGGACAACGAAATCAGGAGATGCGAGAGCGCAAAGACCACTAACATGACGTCGAAACGAAAATAAAAGCGAAGACACGTTTGAACAAAGGCCAGCCGAGAGGGAGGAGGATAAAAATGGACAGATCATGAGTAAACCTCCCTCACAGCAGACTGTGTCCTTCTCCTGCCATCATTCTTACTGTAATCGATCATTcatacgcacacgcacacacatatccCAGCTTTCCATGTACCATTACACGAACACGCTCTCAAAATGATCGTCCCCTGAACATATACATGAGCGAAAGTAAAAACACATGCAGCTCCAGCATTTTATACTACAGATTATGATACAAAATAAGGCATTTCTGTGTATGAGCACAAGTTCATTTGAGCatgtagcgtgtgtgtgtgtgtgtgtgtttgtttgtgtggaaccacatttaatgtcattttttgcCTTGTTTGTACAAAAGACTGCTATTGAACATAAATGGataagtcatttttaaaatatatatatttataatatatatatgta

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064817 True 855 lncRNA 0.37 2 10720042 10722088

Neighbor

gene id symbol gene type direction distance location
XLOC_031879 NA coding upstream 6165 10708691 ~ 10713877 (+)
XLOC_031878 BX936397.1 coding upstream 26619 10691940 ~ 10693423 (+)
XLOC_031876 kcnh7 coding upstream 143385 10450000 ~ 10576657 (+)
XLOC_031877 BX005368.1 coding upstream 183347 10536332 ~ 10536695 (+)
XLOC_031875 NA coding upstream 287965 10431751 ~ 10432077 (+)
XLOC_031881 BX936397.2 coding downstream 5256 10727344 ~ 10733962 (+)
XLOC_031882 NA coding downstream 143680 10865768 ~ 10867454 (+)
XLOC_031883 dre-mir-10d coding downstream 144936 10867024 ~ 10867141 (+)
XLOC_031884 mtx2 coding downstream 149571 10871659 ~ 10879963 (+)
XLOC_031885 NA coding downstream 166973 10889061 ~ 10890224 (+)
XLOC_031874 NA non-coding upstream 321506 10377023 ~ 10398536 (+)
XLOC_031887 NA non-coding downstream 208802 10930890 ~ 10931090 (+)

Expression


Co-expression Network