G1279449


Basic Information

Item Value
gene id G1279449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30395213 ~ 30395447 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1461102
CTATTGAAAATCATGATAAAGTGTTGAGTTTTAAGTTTTAATTCCGTGTTGTATTTTGTAAGGTGGGTGCTGGTAATGAATTATGTGAATTTAATTAAGCAAGCATCTAGAGAGATTTAAACAATTTCCAGAACAGTGTCCTGCTGGAGAAGACTAATGGCGTTCAGTCAAAATAAACTTGATTATAAATGACGTTCACCCACTTGTGCTGAGATGGATTCAATTAAAATAGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1461102 True 235 lncRNA 0.33 1 30395213 30395447

Neighbor

gene id symbol gene type direction distance location
LOC110489977 LOC106590110 coding upstream 49647 30329810 ~ 30345566 (+)
tgif1 LOC106590112 coding upstream 419127 29969944 ~ 29976086 (+)
LOC110489968 LOC106590118 coding upstream 699262 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 730292 29657968 ~ 29664921 (+)
LOC110489961 LOC106590122 coding upstream 780695 29612631 ~ 29614518 (+)
htr5ab htr5a coding downstream 370 30395817 ~ 30416375 (+)
insig1 insig1 coding downstream 86570 30482017 ~ 30496207 (+)
en2a en2 coding downstream 122549 30517996 ~ 30521339 (+)
LOC118938958 NA coding downstream 137649 30533096 ~ 30533257 (+)
rbm33a rbm33 coding downstream 159624 30555071 ~ 30601062 (+)
G1279404 NA non-coding upstream 8124 30386877 ~ 30387089 (+)
G1279395 NA non-coding upstream 20944 30374027 ~ 30374269 (+)
G1279379 NA non-coding upstream 42317 30350492 ~ 30352896 (+)
G1279348 NA non-coding upstream 92333 30302672 ~ 30302880 (+)
G1278514 NA non-coding upstream 280977 30112319 ~ 30114236 (+)
G1279459 NA non-coding downstream 15919 30411366 ~ 30411598 (+)
G1279498 NA non-coding downstream 37742 30433189 ~ 30433524 (+)
G1279501 NA non-coding downstream 38437 30433884 ~ 30434118 (+)
G1279504 NA non-coding downstream 39225 30434672 ~ 30434922 (+)
G1279349 NA other upstream 91794 30303033 ~ 30303419 (+)
G1277279 NA other upstream 1579403 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1770995 28574316 ~ 28624218 (+)
G1276733 NA other upstream 2138807 28190186 ~ 28256406 (+)
G1276288 NA other upstream 2541200 27853618 ~ 27854013 (+)
G1279833 NA other downstream 548724 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1600720 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2292111 32687558 ~ 32698036 (+)
G1284354 NA other downstream 3716360 34111807 ~ 34112271 (+)

Expression


Co-expression Network