G1279459


Basic Information

Item Value
gene id G1279459
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30411366 ~ 30411598 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1461113
atacatcactaaaatgttcaatttggtttaaataatgcaaaaaccaagtgttggagaagaaagtaaaagtgcaatatgtgctatgtaagaaatcaaacgtttcagttccttgctcagaacatgagaacatatgaaagctggtggttccttttaacatgagtcttcaatattcccaggtaagaagttttaggttgtagttattataggaattataggactatttccctctatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1461113 True 233 lncRNA 0.33 1 30411366 30411598

Neighbor

gene id symbol gene type direction distance location
LOC110489977 LOC106590110 coding upstream 65800 30329810 ~ 30345566 (+)
tgif1 LOC106590112 coding upstream 435280 29969944 ~ 29976086 (+)
LOC110489968 LOC106590118 coding upstream 715415 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 746445 29657968 ~ 29664921 (+)
LOC110489961 LOC106590122 coding upstream 796848 29612631 ~ 29614518 (+)
insig1 insig1 coding downstream 70419 30482017 ~ 30496207 (+)
en2a en2 coding downstream 106398 30517996 ~ 30521339 (+)
LOC118938958 NA coding downstream 121498 30533096 ~ 30533257 (+)
rbm33a rbm33 coding downstream 143473 30555071 ~ 30601062 (+)
rnf32 rnf32 coding downstream 303114 30714712 ~ 30725178 (+)
G1279449 NA non-coding upstream 15919 30395213 ~ 30395447 (+)
G1279404 NA non-coding upstream 24277 30386877 ~ 30387089 (+)
G1279395 NA non-coding upstream 37097 30374027 ~ 30374269 (+)
G1279379 NA non-coding upstream 58470 30350492 ~ 30352896 (+)
G1279348 NA non-coding upstream 108486 30302672 ~ 30302880 (+)
htr5ab htr5a non-coding downstream 3115 30395817 ~ 30416375 (+)
G1279498 NA non-coding downstream 21591 30433189 ~ 30433524 (+)
G1279501 NA non-coding downstream 22286 30433884 ~ 30434118 (+)
G1279504 NA non-coding downstream 23074 30434672 ~ 30434922 (+)
G1279517 NA non-coding downstream 31886 30443484 ~ 30443712 (+)
G1279349 NA other upstream 107947 30303033 ~ 30303419 (+)
G1277279 NA other upstream 1595556 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1787148 28574316 ~ 28624218 (+)
G1276733 NA other upstream 2154960 28190186 ~ 28256406 (+)
G1279833 NA other downstream 532573 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1584569 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2275960 32687558 ~ 32698036 (+)
G1284354 NA other downstream 3700209 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 5623985 36035583 ~ 36093396 (+)

Expression


Co-expression Network