G1279498


Basic Information

Item Value
gene id G1279498
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30433189 ~ 30433524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1461152
atggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctaactaacgattccaaaactactgtcttgtacacagtgtaaggggataaagaatatgtacataaggatatatgaatgagtgatggtacagagcagcataggcaagatacagtagatggtatcgagtacagtatatacatatgagatgagtatgtaaacaagtggcatagttaaagtggctagtgatacatgtattacataaggatacagtcgatgatatagagtacagtatatacgtatgcatatgagatgaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1461152 True 336 lncRNA 0.36 1 30433189 30433524

Neighbor

gene id symbol gene type direction distance location
htr5ab htr5a coding upstream 16814 30395817 ~ 30416375 (+)
LOC110489977 LOC106590110 coding upstream 87623 30329810 ~ 30345566 (+)
tgif1 LOC106590112 coding upstream 457103 29969944 ~ 29976086 (+)
LOC110489968 LOC106590118 coding upstream 737238 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 768268 29657968 ~ 29664921 (+)
insig1 insig1 coding downstream 48493 30482017 ~ 30496207 (+)
en2a en2 coding downstream 84472 30517996 ~ 30521339 (+)
LOC118938958 NA coding downstream 99572 30533096 ~ 30533257 (+)
rbm33a rbm33 coding downstream 121547 30555071 ~ 30601062 (+)
rnf32 rnf32 coding downstream 281188 30714712 ~ 30725178 (+)
G1279459 NA non-coding upstream 21591 30411366 ~ 30411598 (+)
G1279449 NA non-coding upstream 37742 30395213 ~ 30395447 (+)
G1279404 NA non-coding upstream 46100 30386877 ~ 30387089 (+)
G1279395 NA non-coding upstream 58920 30374027 ~ 30374269 (+)
G1279501 NA non-coding downstream 360 30433884 ~ 30434118 (+)
G1279504 NA non-coding downstream 1148 30434672 ~ 30434922 (+)
G1279517 NA non-coding downstream 9960 30443484 ~ 30443712 (+)
G1279520 NA non-coding downstream 13353 30446877 ~ 30447153 (+)
G1279525 NA non-coding downstream 22339 30455863 ~ 30456064 (+)
G1279349 NA other upstream 129770 30303033 ~ 30303419 (+)
G1277279 NA other upstream 1617379 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1808971 28574316 ~ 28624218 (+)
G1276733 NA other upstream 2176783 28190186 ~ 28256406 (+)
G1279833 NA other downstream 510647 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1562643 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2254034 32687558 ~ 32698036 (+)
G1284354 NA other downstream 3678283 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 5602059 36035583 ~ 36093396 (+)

Expression


Co-expression Network