XLOC_031881 (BX936397.2)


Basic Information

Item Value
gene id XLOC_031881
gene name BX936397.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 10727344 ~ 10733962 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00062431
CCGTACAAAGCGAAGGCTCACAGGAAGTGTTCGACTTTTCCCCTATTTTTAAAACGTGTGAActtcaccaaaacaccacaacaCCCCGCGAGACAGCGCCGGGGAGGCGAGAAACCAACCGGGGGATTTCATACCTGGTCCTGGGCGCCGCTGGCCGGCTGCAGAAAGTCGCTCTGACTGCTGTCCACGTCCAAGGCAGCCATTTCCTGCTGTTTCGCTGGCTGTTCTGGGGCTACGGAGACACAGCGAGagaaaaaactcaaaacaaattCATGCTCAAAGAACTCCCACCTCGAAAAGGCGGAGATTAGCCGCCAAACCGCCTGGAATTTAAACGAACCAGGCGGACCTTTCTGCTGTCGCGGTGCCCGAGCAACAGTCTTCCCAAATGTTTACTTTGTTAAAGTGAGGCTAGCTGGCTAACGGTTAGCGTCTCTGCTGAGAAAGATTAAACACTGAGCTAGCTCGCTTGGCTAATGGCTCTCCAAACTCACCGGCGGTGCTGTGCTTCGATCGGGATAAGTGTTACGTACCAGTCATAGCGTGAAAAGTGGGAGTTCAACTGTTCAGGACAATGGCCCTCAAGTAGCAAGTCTGCATATCCCGCTTTAAAACAATATCATCTGGCAAACATGGATCAgcaaattcatttataaaagttGATCAAATAGTGTTCCCTTGTCACAAACTGCTTAAATGAGGCCGACATGCAACCAtactatacatgttttttttttttttttttttttaatgcagatgTGCTCAGTAAAATATTGTATCCTGCATTGAAATGATCAACTTGCCCTCACATTCCTAAATGCTGCTTATATAATTTCTCTTTAATAAACAGACGTTTTTACCTAAAATACCTTTGATAACTTTTTACCTTCGATCACCTGTGACAACATTTTGGActgtttttttcttaataatcTGAATTTTGCTTTGAATGCTCTGCTATTTAAGTATAGTAAAAACAATGCAATAAAGTGATTCTTTATTAAACTTTCAATCGGC

Function

GO:

id name namespace
GO:0008543 fibroblast growth factor receptor signaling pathway biological_process
GO:0044344 cellular response to fibroblast growth factor stimulus biological_process
GO:0071774 response to fibroblast growth factor biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096373

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00062431 True 1017 lncRNA 0.43 2 10727344 10733962

Neighbor

gene id symbol gene type direction distance location
XLOC_031880 NA coding upstream 5256 10720042 ~ 10722088 (+)
XLOC_031879 NA coding upstream 13467 10708691 ~ 10713877 (+)
XLOC_031878 BX936397.1 coding upstream 33921 10691940 ~ 10693423 (+)
XLOC_031876 kcnh7 coding upstream 150687 10450000 ~ 10576657 (+)
XLOC_031877 BX005368.1 coding upstream 190649 10536332 ~ 10536695 (+)
XLOC_031882 NA coding downstream 131806 10865768 ~ 10867454 (+)
XLOC_031883 dre-mir-10d coding downstream 133062 10867024 ~ 10867141 (+)
XLOC_031884 mtx2 coding downstream 137697 10871659 ~ 10879963 (+)
XLOC_031885 NA coding downstream 155099 10889061 ~ 10890224 (+)
XLOC_031886 si:dkey-3d18.5 coding downstream 169532 10903494 ~ 10904582 (+)
XLOC_031875 NA non-coding upstream 295267 10431751 ~ 10432077 (+)
XLOC_031887 NA non-coding downstream 196928 10930890 ~ 10931090 (+)
XLOC_031888 NA non-coding downstream 254683 10988645 ~ 11008430 (+)

Expression


Co-expression Network