G1279517


Basic Information

Item Value
gene id G1279517
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30443484 ~ 30443712 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1461171
gtgtctgtttgtgtctgtgagtgtcttGTCAGTTAACAGTGTGTGTCTAGTGGGTGCCTTCCATTGATAAAATGTGCAGGCCAAATTAGATTTCCCAGTGTGGGGGATATCAAAGAAACACAGATGATATCTGCGCTGTTTGGCCAAGTAGCCAATCAAGGGACTGATTCAGTCCCAGCCTGGAAGTCTGAATGTCCTCGACTTTGCAGAGATAAGCGCTGTAAGTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1461171 True 229 lncRNA 0.46 1 30443484 30443712

Neighbor

gene id symbol gene type direction distance location
htr5ab htr5a coding upstream 27109 30395817 ~ 30416375 (+)
LOC110489977 LOC106590110 coding upstream 97918 30329810 ~ 30345566 (+)
tgif1 LOC106590112 coding upstream 467398 29969944 ~ 29976086 (+)
LOC110489968 LOC106590118 coding upstream 747533 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 778563 29657968 ~ 29664921 (+)
insig1 insig1 coding downstream 38305 30482017 ~ 30496207 (+)
en2a en2 coding downstream 74284 30517996 ~ 30521339 (+)
LOC118938958 NA coding downstream 89384 30533096 ~ 30533257 (+)
rbm33a rbm33 coding downstream 111359 30555071 ~ 30601062 (+)
rnf32 rnf32 coding downstream 271000 30714712 ~ 30725178 (+)
G1279504 NA non-coding upstream 8562 30434672 ~ 30434922 (+)
G1279501 NA non-coding upstream 9366 30433884 ~ 30434118 (+)
G1279498 NA non-coding upstream 9960 30433189 ~ 30433524 (+)
G1279459 NA non-coding upstream 31886 30411366 ~ 30411598 (+)
G1279520 NA non-coding downstream 3165 30446877 ~ 30447153 (+)
G1279525 NA non-coding downstream 12151 30455863 ~ 30456064 (+)
G1279535 NA non-coding downstream 26399 30470111 ~ 30470346 (+)
G1279541 NA non-coding downstream 46873 30490585 ~ 30493737 (+)
G1279605 NA non-coding downstream 73677 30517389 ~ 30517605 (+)
G1279349 NA other upstream 140065 30303033 ~ 30303419 (+)
G1277279 NA other upstream 1627674 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1819266 28574316 ~ 28624218 (+)
G1276733 NA other upstream 2187078 28190186 ~ 28256406 (+)
G1279833 NA other downstream 500459 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1552455 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2243846 32687558 ~ 32698036 (+)
G1284354 NA other downstream 3668095 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 5591871 36035583 ~ 36093396 (+)

Expression


Co-expression Network