Gene
RNA
| Item | Value |
|---|---|
| gene id | G1279525 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 30455863 ~ 30456064 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1461179 | True | 202 | lncRNA | 0.36 | 1 | 30455863 | 30456064 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| htr5ab | htr5a | coding | upstream | 39488 | 30395817 ~ 30416375 (+) |
| LOC110489977 | LOC106590110 | coding | upstream | 110297 | 30329810 ~ 30345566 (+) |
| tgif1 | LOC106590112 | coding | upstream | 479777 | 29969944 ~ 29976086 (+) |
| LOC110489968 | LOC106590118 | coding | upstream | 759912 | 29689717 ~ 29695951 (+) |
| ackr4b | LOC106590119 | coding | upstream | 790942 | 29657968 ~ 29664921 (+) |
| insig1 | insig1 | coding | downstream | 25953 | 30482017 ~ 30496207 (+) |
| en2a | en2 | coding | downstream | 61932 | 30517996 ~ 30521339 (+) |
| LOC118938958 | NA | coding | downstream | 77032 | 30533096 ~ 30533257 (+) |
| rbm33a | rbm33 | coding | downstream | 99007 | 30555071 ~ 30601062 (+) |
| rnf32 | rnf32 | coding | downstream | 258648 | 30714712 ~ 30725178 (+) |
| G1279520 | NA | non-coding | upstream | 8710 | 30446877 ~ 30447153 (+) |
| G1279517 | NA | non-coding | upstream | 12151 | 30443484 ~ 30443712 (+) |
| G1279504 | NA | non-coding | upstream | 20941 | 30434672 ~ 30434922 (+) |
| G1279501 | NA | non-coding | upstream | 21745 | 30433884 ~ 30434118 (+) |
| G1279498 | NA | non-coding | upstream | 22339 | 30433189 ~ 30433524 (+) |
| G1279535 | NA | non-coding | downstream | 14047 | 30470111 ~ 30470346 (+) |
| G1279541 | NA | non-coding | downstream | 34521 | 30490585 ~ 30493737 (+) |
| G1279605 | NA | non-coding | downstream | 61325 | 30517389 ~ 30517605 (+) |
| G1279793 | NA | non-coding | downstream | 347739 | 30803803 ~ 30804010 (+) |
| G1279349 | NA | other | upstream | 152444 | 30303033 ~ 30303419 (+) |
| G1277279 | NA | other | upstream | 1640053 | 28815366 ~ 28815810 (+) |
| G1277159 | NA | other | upstream | 1831645 | 28574316 ~ 28624218 (+) |
| G1276733 | NA | other | upstream | 2199457 | 28190186 ~ 28256406 (+) |
| G1279833 | NA | other | downstream | 488107 | 30944171 ~ 30947330 (+) |
| G1281462 | NA | other | downstream | 1540103 | 31996167 ~ 31996513 (+) |
| G1282302 | NA | other | downstream | 2231494 | 32687558 ~ 32698036 (+) |
| G1284354 | NA | other | downstream | 3655743 | 34111807 ~ 34112271 (+) |
| G1286648 | LOC106590042 | other | downstream | 5579519 | 36035583 ~ 36093396 (+) |
