G1279806


Basic Information

Item Value
gene id G1279806
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30831666 ~ 30831998 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1461483
atgtaaatatcacatttgcgtaagtattcagaccctttactcagtactttgttgaagcacctttggcagcaattacagcctcaagtcttcttggatatgacactacaagcttggcacacctgtatttggggagtttcttccattcttctctgcagatcctctcaagctctgtcaagttggatggggagcgttgctgcacagctattatcaggtctctccagagatgttagatcgggttcaagtccggggtctggctgagccactcaaggacgttcagagacatgtcctgaagccactgctgcgttgtcttggctgtgtgcttagggtcgttgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1461483 True 333 lncRNA 0.48 1 30831666 30831998

Neighbor

gene id symbol gene type direction distance location
nom1 nom1 coding upstream 39965 30783923 ~ 30791701 (+)
rnf32 rnf32 coding upstream 106488 30714712 ~ 30725178 (+)
rbm33a rbm33 coding upstream 230604 30555071 ~ 30601062 (+)
LOC118938958 NA coding upstream 298409 30533096 ~ 30533257 (+)
en2a en2 coding upstream 310327 30517996 ~ 30521339 (+)
dnajb6b NA coding downstream 34980 30866978 ~ 30914115 (+)
LOC118938793 NA coding downstream 78135 30910133 ~ 30911620 (+)
dync2i1 wdr60 coding downstream 457201 31289199 ~ 31306437 (+)
wdr97 LOC106590093 coding downstream 474648 31306646 ~ 31332697 (+)
nrn1a LOC106590090 coding downstream 609496 31441494 ~ 31447498 (+)
G1279805 NA non-coding upstream 2839 30828627 ~ 30828827 (+)
G1279758 NA non-coding upstream 9295 30821921 ~ 30822371 (+)
G1279793 NA non-coding upstream 27656 30803803 ~ 30804010 (+)
G1279605 NA non-coding upstream 314061 30517389 ~ 30517605 (+)
G1279809 NA non-coding downstream 3049 30835047 ~ 30835462 (+)
G1279958 NA non-coding downstream 243293 31075291 ~ 31127396 (+)
G1279960 NA non-coding downstream 244071 31076069 ~ 31077550 (+)
G1279966 NA non-coding downstream 252432 31084430 ~ 31132153 (+)
G1280062 ncapg2 non-coding downstream 379343 31211341 ~ 31214897 (+)
htr5ab htr5a other upstream 423649 30395817 ~ 30416375 (+)
G1279349 NA other upstream 528247 30303033 ~ 30303419 (+)
G1277279 NA other upstream 2015856 28815366 ~ 28815810 (+)
G1277159 NA other upstream 2207448 28574316 ~ 28624218 (+)
G1276733 NA other upstream 2575260 28190186 ~ 28256406 (+)
G1279833 NA other downstream 112173 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1164169 31996167 ~ 31996513 (+)
G1282302 NA other downstream 1855560 32687558 ~ 32698036 (+)
G1284354 NA other downstream 3279809 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 5203585 36035583 ~ 36093396 (+)

Expression


Co-expression Network