G1280062 (ncapg2)


Basic Information

Item Value
gene id G1280062
gene name ncapg2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31211341 ~ 31214897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1461764
TCGGCCAAATAGGTATTATTTATAGACACAGCCATTAACAATCTGATTGAAGAGACGACCTCTAATGACCTAAGGGTGCGTTTTTGATTGACACTCAAATCAGCACACACCAAACCAAACAGTCAATAAAAAGCCCTTTGTTGATACGGCGACTGATGACTTCAGATGCAtccaaaatggaaccctattccctataaatagTGAAGGGTGCCATTTGCGAAGCAGCCATCCTCCACACCTCCTGGCCCTCCTCAGGGTCCTTCCTCAGGCGGCGAGCCATGACCTCCAGGATCTTCTGGAAGATGTTGGTAACCACGCTGAGGATGATGGAGGACTGGTCGTCCTGGGCCTGGTTCTCGGGGACGTAGTTCTCCGCCACCTCCGTCAGCACAGAGAGCAGCAGTGGAACACACAGGTAGCCCTTCTCtgagaacaCAGAGAGGAGCACGACGGAGCACAGGTGAAGGACCTGCCCTTTGAACTCCTCGTCCCCAAGGCCCACCCGGATCACATCGCTGCACACTGTGAGGAAATCTCTACCACCTGCCTGGCGAggccctgctgctgctcagtgaCCCCTCCCTCACTGGGACTGACCAGGAAGGGCAGCGCCCTCTCTGCCACCCATGCTGCGGTGTTCTCCACAGAAACCAGGAAATCCCTGCACTCAGAGAACTGAGAAAGAAAAGACGTGGTTATAGAACAGAAAGCCCTGGGTGGTTATAACAGGTGGTAAAAGGTGGTTATAGCCCAAACACGGCACAGACCAgaaattaatataataaataatatatgccgtttagcagacacttttattcaAAGTCTACTTAGTTATGCG

Function

symbol description
ncapg2 Predicted to be involved in mitotic sister chromatid segregation. Predicted to act upstream of or within cell division and chromosome condensation. Predicted to be part of condensin complex. Predicted to be active in nucleus. Is expressed in brain and spinal cord. Orthologous to human NCAPG2 (non-SMC condensin II complex subunit G2).

NR:

description
condensin-2 complex subunit G2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1461764 True 838 lncRNA 0.51 3 31211341 31214897

Neighbor

gene id symbol gene type direction distance location
dnajb6b NA coding upstream 297226 30866978 ~ 30914115 (+)
LOC118938793 NA coding upstream 299721 30910133 ~ 30911620 (+)
ube3c ube3c coding upstream 353389 30809968 ~ 30857952 (+)
nom1 nom1 coding upstream 419640 30783923 ~ 30791701 (+)
rnf32 rnf32 coding upstream 486163 30714712 ~ 30725178 (+)
dync2i1 wdr60 coding downstream 74302 31289199 ~ 31306437 (+)
wdr97 LOC106590093 coding downstream 91749 31306646 ~ 31332697 (+)
nrn1a LOC106590090 coding downstream 226597 31441494 ~ 31447498 (+)
LOC110490003 cssa29h18orf63 coding downstream 543829 31758726 ~ 31792146 (+)
LOC110490007 LOC106590083 coding downstream 695889 31910786 ~ 31924479 (+)
G1279966 NA non-coding upstream 79188 31084430 ~ 31132153 (+)
G1279958 NA non-coding upstream 83945 31075291 ~ 31127396 (+)
G1279960 NA non-coding upstream 133791 31076069 ~ 31077550 (+)
G1279809 NA non-coding upstream 375879 30835047 ~ 30835462 (+)
G1279806 NA non-coding upstream 379343 30831666 ~ 30831998 (+)
G1280080 NA non-coding downstream 22777 31237674 ~ 31238866 (+)
G1280642 NA non-coding downstream 152662 31367559 ~ 31373233 (+)
G1280645 NA non-coding downstream 156657 31371554 ~ 31372376 (+)
G1280663 NA non-coding downstream 182147 31397044 ~ 31397294 (+)
G1280668 NA non-coding downstream 194442 31409339 ~ 31409552 (+)
G1279833 NA other upstream 264011 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 803324 30395817 ~ 30416375 (+)
G1279349 NA other upstream 907922 30303033 ~ 30303419 (+)
G1277279 NA other upstream 2395531 28815366 ~ 28815810 (+)
G1277159 NA other upstream 2587123 28574316 ~ 28624218 (+)
G1281462 NA other downstream 781270 31996167 ~ 31996513 (+)
G1282302 NA other downstream 1472661 32687558 ~ 32698036 (+)
G1284354 NA other downstream 2896910 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 4820686 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 5294181 36509078 ~ 36510512 (+)

Expression


Co-expression Network