G1280686


Basic Information

Item Value
gene id G1280686
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31432287 ~ 31432869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1462459
GATATCAGCTCGTCCTTGAGTTGCTCCGACAACCCCTGGTAAAAAAAACGCttgtagtgactcctcattccaaccactctccacagacaatgtcctgaactcgatcataaagtctgccacactgcgagcTCCTTGGCGAAGAGTGAACAAACGTTTAGCTGCGTCCTTACCTCGGACTGGATGGTCAAAAAGCTTTCTCATCTCTCCCGTGAACTCCTGGTATGAAGCCATGCAGGTCTCCTGTCGTTCCCAAACGGCTGAAGCCCATTCCAGAGCTCTTCCACGCAGCAGTTCAATAACAAAGGCTATCCTAGCCTTGTCAGTGGCGTAAGAATGGGGCTGCAGATCAAACACTAACCCACACTGCATAAGAAACGAACGGCATCTTCCCAAATCCCCTTCATATTTATCAGGCGTCGGTACCTTGGGTTCACAGAAGGAAACCACACCAGACACGGCAGGTGAGATGGGTGAAACAGATGGTGAATGAATCGCCGGCAAACTGAGCTGATCCTGGATTTGTGTCAAGCTAGCAGATAAGTTCTGGATTGAACCCGCTATCTCCTGTAGCGCCGTCTTGTGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1462459 True 583 lncRNA 0.50 1 31432287 31432869

Neighbor

gene id symbol gene type direction distance location
wdr97 LOC106590093 coding upstream 99590 31306646 ~ 31332697 (+)
dync2i1 wdr60 coding upstream 125850 31289199 ~ 31306437 (+)
dnajb6b NA coding upstream 518172 30866978 ~ 30914115 (+)
LOC118938793 NA coding upstream 520667 30910133 ~ 30911620 (+)
ube3c ube3c coding upstream 574335 30809968 ~ 30857952 (+)
nrn1a LOC106590090 coding downstream 8625 31441494 ~ 31447498 (+)
LOC110490003 cssa29h18orf63 coding downstream 325857 31758726 ~ 31792146 (+)
LOC110490007 LOC106590083 coding downstream 477917 31910786 ~ 31924479 (+)
inhbaa LOC106590082 coding downstream 529966 31962835 ~ 31974011 (+)
LOC118938888 NA coding downstream 575252 32008121 ~ 32011745 (+)
G1280683 NA non-coding upstream 2504 31429555 ~ 31429783 (+)
G1280681 LOC106581772 non-coding upstream 4727 31427071 ~ 31427560 (+)
G1280668 NA non-coding upstream 22735 31409339 ~ 31409552 (+)
G1280663 NA non-coding upstream 34993 31397044 ~ 31397294 (+)
G1280642 NA non-coding upstream 59054 31367559 ~ 31373233 (+)
G1280687 NA non-coding downstream 1749 31434618 ~ 31434856 (+)
G1280754 NA non-coding downstream 21801 31454670 ~ 31454892 (+)
G1280793 NA non-coding downstream 55559 31488428 ~ 31488636 (+)
G1280808 NA non-coding downstream 66708 31499577 ~ 31500277 (+)
G1280817 NA non-coding downstream 70718 31503587 ~ 31504112 (+)
G1279833 NA other upstream 484957 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 1024270 30395817 ~ 30416375 (+)
G1279349 NA other upstream 1128868 30303033 ~ 30303419 (+)
G1277279 NA other upstream 2616477 28815366 ~ 28815810 (+)
G1277159 NA other upstream 2808069 28574316 ~ 28624218 (+)
G1281462 NA other downstream 563298 31996167 ~ 31996513 (+)
G1282302 NA other downstream 1254689 32687558 ~ 32698036 (+)
G1284354 NA other downstream 2678938 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 4602714 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 5076209 36509078 ~ 36510512 (+)

Expression


Co-expression Network