G1280826


Basic Information

Item Value
gene id G1280826
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31511128 ~ 31511451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1462600
taagcacacagccaagacaacacaggagtggcttcaggacaagtctctgaatttccttgagtggcccagccagagcccggacttgaacccgatcaaacatctctggggagacctgacaatatctgtgcagcgatgctcaccatccaacctgacagaacttgagaggattggcagggaagaatgggagaaattcctcaaatataggtgtgccaagcttgtagcatcatacccaagaagactcgaggctgtaatcgctgccaaaggtgcttcaacaaagtactgagtaaagagtctgaatacttttgtaaacgtgatatttcagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1462600 True 324 lncRNA 0.47 1 31511128 31511451

Neighbor

gene id symbol gene type direction distance location
nrn1a LOC106590090 coding upstream 63630 31441494 ~ 31447498 (+)
wdr97 LOC106590093 coding upstream 178431 31306646 ~ 31332697 (+)
dync2i1 wdr60 coding upstream 204691 31289199 ~ 31306437 (+)
dnajb6b NA coding upstream 597013 30866978 ~ 30914115 (+)
LOC110490003 cssa29h18orf63 coding downstream 247275 31758726 ~ 31792146 (+)
LOC110490007 LOC106590083 coding downstream 399335 31910786 ~ 31924479 (+)
inhbaa LOC106590082 coding downstream 451384 31962835 ~ 31974011 (+)
LOC118938888 NA coding downstream 496670 32008121 ~ 32011745 (+)
LOC110490011 LOC106590060 coding downstream 839354 32350805 ~ 32480547 (+)
G1280817 NA non-coding upstream 7016 31503587 ~ 31504112 (+)
G1280808 NA non-coding upstream 10851 31499577 ~ 31500277 (+)
G1280793 NA non-coding upstream 22492 31488428 ~ 31488636 (+)
G1280754 NA non-coding upstream 56236 31454670 ~ 31454892 (+)
G1280687 NA non-coding upstream 76272 31434618 ~ 31434856 (+)
G1280851 NA non-coding downstream 17277 31528728 ~ 31528929 (+)
G1280855 NA non-coding downstream 20517 31531968 ~ 31532242 (+)
G1280859 NA non-coding downstream 25399 31536850 ~ 31537118 (+)
G1280888 NA non-coding downstream 46981 31558432 ~ 31559436 (+)
G1280890 NA non-coding downstream 49162 31560613 ~ 31560962 (+)
G1279833 NA other upstream 563798 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 1103111 30395817 ~ 30416375 (+)
G1279349 NA other upstream 1207709 30303033 ~ 30303419 (+)
G1277279 NA other upstream 2695318 28815366 ~ 28815810 (+)
G1277159 NA other upstream 2886910 28574316 ~ 28624218 (+)
G1281462 NA other downstream 484716 31996167 ~ 31996513 (+)
G1282302 NA other downstream 1176107 32687558 ~ 32698036 (+)
G1284354 NA other downstream 2600356 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 4524132 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 4997627 36509078 ~ 36510512 (+)

Expression


Co-expression Network