G1280859



Basic Information


Item Value
gene id G1280859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31536850 ~ 31537118 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1462634
ccccaaaggtatgtggacaccccttcagtgtaaattcagctatttcagccacacctgtggctgacaggtgtataaaattgagcacacagccatgcaatctccatagacaaacattggcagtagaatggcccatactgaagagctaaGTGACATTtaacatggcactgtcatagtatgccacctttccaacaggtcagtttgtaaaatttctgccccGCTAGTGCTGTTCAAAGTTGCTGTTCACTGCCACTCCTCGTCTAACTTCACAG

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1462634 True 269 lncRNA 0.46 1 31536850 31537118

Neighbor


gene id symbol gene type direction distance location
nrn1a LOC106590090 coding upstream 89352 31441494 ~ 31447498 (+)
wdr97 LOC106590093 coding upstream 204153 31306646 ~ 31332697 (+)
dync2i1 wdr60 coding upstream 230413 31289199 ~ 31306437 (+)
dnajb6b NA coding upstream 622735 30866978 ~ 30914115 (+)
LOC110490003 cssa29h18orf63 coding downstream 221608 31758726 ~ 31792146 (+)
LOC110490007 LOC106590083 coding downstream 373668 31910786 ~ 31924479 (+)
inhbaa LOC106590082 coding downstream 425717 31962835 ~ 31974011 (+)
LOC118938888 NA coding downstream 471003 32008121 ~ 32011745 (+)
LOC110490011 LOC106590060 coding downstream 813687 32350805 ~ 32480547 (+)
G1280855 NA non-coding upstream 4608 31531968 ~ 31532242 (+)
G1280851 NA non-coding upstream 7921 31528728 ~ 31528929 (+)
G1280826 NA non-coding upstream 25399 31511128 ~ 31511451 (+)
G1280817 NA non-coding upstream 32738 31503587 ~ 31504112 (+)
G1280808 NA non-coding upstream 36573 31499577 ~ 31500277 (+)
G1280888 NA non-coding downstream 21314 31558432 ~ 31559436 (+)
G1280890 NA non-coding downstream 23495 31560613 ~ 31560962 (+)
G1280893 NA non-coding downstream 24594 31561712 ~ 31561956 (+)
G1280993 NA non-coding downstream 169478 31706596 ~ 31743544 (+)
G1281163 NA non-coding downstream 224488 31761606 ~ 31761824 (+)
G1279833 NA other upstream 589520 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 1128833 30395817 ~ 30416375 (+)
G1279349 NA other upstream 1233431 30303033 ~ 30303419 (+)
G1277279 NA other upstream 2721040 28815366 ~ 28815810 (+)
G1277159 NA other upstream 2912632 28574316 ~ 28624218 (+)
G1281462 NA other downstream 459049 31996167 ~ 31996513 (+)
G1282302 NA other downstream 1150440 32687558 ~ 32698036 (+)
G1284354 NA other downstream 2574689 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 4498465 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 4971960 36509078 ~ 36510512 (+)

Expression



Co-expression Network