G1280890


Basic Information

Item Value
gene id G1280890
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31560613 ~ 31560962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1462665
gggtgatgtCGTCTACACAACGCATTACCGAGGGCAAACTacccgccctccaggacacctacagcacccaatgtcacaggaaggccaaaaatatcatcaagggcatcaaccacccgagccactgcctgtttaccccgttatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggaacgagagactgaaaaatagcttctatctccgTGTCATCAGACTGTAGTCATagactaggaatcactggccactttaaggaatggaagacaagtcactttaataatgtttacatatctggtatatactgttttctatactattctacggtatctcattcacttaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1462665 True 350 lncRNA 0.45 1 31560613 31560962

Neighbor

gene id symbol gene type direction distance location
nrn1a LOC106590090 coding upstream 113115 31441494 ~ 31447498 (+)
wdr97 LOC106590093 coding upstream 227916 31306646 ~ 31332697 (+)
dync2i1 wdr60 coding upstream 254176 31289199 ~ 31306437 (+)
dnajb6b NA coding upstream 646498 30866978 ~ 30914115 (+)
LOC110490003 cssa29h18orf63 coding downstream 197764 31758726 ~ 31792146 (+)
LOC110490007 LOC106590083 coding downstream 349824 31910786 ~ 31924479 (+)
inhbaa LOC106590082 coding downstream 401873 31962835 ~ 31974011 (+)
LOC118938888 NA coding downstream 447159 32008121 ~ 32011745 (+)
LOC110490011 LOC106590060 coding downstream 789843 32350805 ~ 32480547 (+)
G1280888 NA non-coding upstream 1177 31558432 ~ 31559436 (+)
G1280859 NA non-coding upstream 23495 31536850 ~ 31537118 (+)
G1280855 NA non-coding upstream 28371 31531968 ~ 31532242 (+)
G1280851 NA non-coding upstream 31684 31528728 ~ 31528929 (+)
G1280826 NA non-coding upstream 49162 31511128 ~ 31511451 (+)
G1280893 NA non-coding downstream 750 31561712 ~ 31561956 (+)
G1280993 NA non-coding downstream 145634 31706596 ~ 31743544 (+)
G1281163 NA non-coding downstream 200644 31761606 ~ 31761824 (+)
G1281164 NA non-coding downstream 201360 31762322 ~ 31762633 (+)
G1281174 NA non-coding downstream 208869 31769831 ~ 31770034 (+)
G1279833 NA other upstream 613283 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 1152596 30395817 ~ 30416375 (+)
G1279349 NA other upstream 1257194 30303033 ~ 30303419 (+)
G1277279 NA other upstream 2744803 28815366 ~ 28815810 (+)
G1277159 NA other upstream 2936395 28574316 ~ 28624218 (+)
G1281462 NA other downstream 435205 31996167 ~ 31996513 (+)
G1282302 NA other downstream 1126596 32687558 ~ 32698036 (+)
G1284354 NA other downstream 2550845 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 4474621 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 4948116 36509078 ~ 36510512 (+)

Expression


Co-expression Network