G1281164


Basic Information

Item Value
gene id G1281164
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31762322 ~ 31762633 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1462954
cgaaaacaaaacttttattatttcagtgaaatacggaaccgttcagtattttatctaacgggtggcatccctaagtctaaatattattgttacattgcacaaccttcaatgttatgtcataattatgtacaattctgacaaattagttcgcaatgagccaggctgcccaaactgttgcatataccctgactctgcgtgcaagagaagtgacacaatttcacctggttaatattgcctgctaacctggatttcttttagctaaatatgcaggttaaaaaatatatacttctgtgtattgattttaagaaaggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1462954 True 312 lncRNA 0.35 1 31762322 31762633

Neighbor

gene id symbol gene type direction distance location
nrn1a LOC106590090 coding upstream 314824 31441494 ~ 31447498 (+)
wdr97 LOC106590093 coding upstream 429625 31306646 ~ 31332697 (+)
dync2i1 wdr60 coding upstream 455885 31289199 ~ 31306437 (+)
dnajb6b NA coding upstream 848207 30866978 ~ 30914115 (+)
LOC110490007 LOC106590083 coding downstream 148153 31910786 ~ 31924479 (+)
inhbaa LOC106590082 coding downstream 200202 31962835 ~ 31974011 (+)
LOC118938888 NA coding downstream 245488 32008121 ~ 32011745 (+)
LOC110490011 LOC106590060 coding downstream 588172 32350805 ~ 32480547 (+)
LOC118938962 NA coding downstream 1170163 32932796 ~ 32932850 (+)
G1281163 NA non-coding upstream 498 31761606 ~ 31761824 (+)
G1280993 NA non-coding upstream 18778 31706596 ~ 31743544 (+)
G1280893 NA non-coding upstream 200366 31561712 ~ 31561956 (+)
G1280890 NA non-coding upstream 201360 31560613 ~ 31560962 (+)
G1280888 NA non-coding upstream 202886 31558432 ~ 31559436 (+)
G1281174 NA non-coding downstream 7198 31769831 ~ 31770034 (+)
G1281175 NA non-coding downstream 8022 31770655 ~ 31770909 (+)
G1281187 NA non-coding downstream 15015 31777648 ~ 31777942 (+)
G1281199 NA non-coding downstream 22114 31784747 ~ 31785105 (+)
G1281218 NA non-coding downstream 32485 31795118 ~ 31795342 (+)
G1279833 NA other upstream 814992 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 1354305 30395817 ~ 30416375 (+)
G1279349 NA other upstream 1458903 30303033 ~ 30303419 (+)
G1277279 NA other upstream 2946512 28815366 ~ 28815810 (+)
G1277159 NA other upstream 3138104 28574316 ~ 28624218 (+)
G1281462 NA other downstream 233534 31996167 ~ 31996513 (+)
G1282302 NA other downstream 924925 32687558 ~ 32698036 (+)
G1284354 NA other downstream 2349174 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 4272950 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 4746445 36509078 ~ 36510512 (+)

Expression


Co-expression Network