G1281272


Basic Information

Item Value
gene id G1281272
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31867252 ~ 31867494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1463072
ggtcacttgatgcagcactccatcactctccttcttggtcaaatagcccttacacagcctggaggtgtgttggttcattgtcctgttgaaaaacaaatgatagtcccactaagcgcaaaccagatgggatggcgtatcgctgcagaatgctgtagtagcaaagctggtcaagtgtgccttgaattctatataaatcacagtcagtgtcaccagcaaagcacccccacatcatcacaccacctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1463072 True 243 lncRNA 0.48 1 31867252 31867494

Neighbor

gene id symbol gene type direction distance location
LOC110490003 cssa29h18orf63 coding upstream 75106 31758726 ~ 31792146 (+)
nrn1a LOC106590090 coding upstream 419754 31441494 ~ 31447498 (+)
wdr97 LOC106590093 coding upstream 534555 31306646 ~ 31332697 (+)
dync2i1 wdr60 coding upstream 560815 31289199 ~ 31306437 (+)
LOC118938793 NA coding upstream 955632 30910133 ~ 30911620 (+)
LOC110490007 LOC106590083 coding downstream 43292 31910786 ~ 31924479 (+)
inhbaa LOC106590082 coding downstream 95341 31962835 ~ 31974011 (+)
LOC118938888 NA coding downstream 140627 32008121 ~ 32011745 (+)
LOC110490011 LOC106590060 coding downstream 483311 32350805 ~ 32480547 (+)
LOC118938962 NA coding downstream 1065302 32932796 ~ 32932850 (+)
G1281269 NA non-coding upstream 3805 31863227 ~ 31863447 (+)
G1281218 NA non-coding upstream 71910 31795118 ~ 31795342 (+)
G1281199 NA non-coding upstream 82147 31784747 ~ 31785105 (+)
G1281187 NA non-coding upstream 89310 31777648 ~ 31777942 (+)
G1281175 NA non-coding upstream 96343 31770655 ~ 31770909 (+)
G1281275 NA non-coding downstream 2377 31869871 ~ 31870175 (+)
G1281284 NA non-coding downstream 19234 31886728 ~ 31887149 (+)
G1281294 NA non-coding downstream 37968 31905462 ~ 31905672 (+)
G1281410 NA non-coding downstream 70293 31937787 ~ 31937988 (+)
G1281423 NA non-coding downstream 78863 31946357 ~ 31946575 (+)
G1279833 NA other upstream 919922 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 1459235 30395817 ~ 30416375 (+)
G1279349 NA other upstream 1563833 30303033 ~ 30303419 (+)
G1277279 NA other upstream 3051442 28815366 ~ 28815810 (+)
G1277159 NA other upstream 3243034 28574316 ~ 28624218 (+)
G1281462 NA other downstream 128673 31996167 ~ 31996513 (+)
G1282302 NA other downstream 820064 32687558 ~ 32698036 (+)
G1284354 NA other downstream 2244313 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 4168089 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 4641584 36509078 ~ 36510512 (+)

Expression


Co-expression Network