G1281448


Basic Information

Item Value
gene id G1281448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31976245 ~ 31976450 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1463266
GTTCCAAGaggttaaggcaagggctgatttcaaggtcttactgctaacctacaaagcattacatgggcttgctcctacccatctttccgatttggtcctgccgtacataactacacgtacgctacggtcacaagacgcaggcctcctaattgtccctagaatttctaagcaaacagctggaggctttctcctataaagctcaattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1463266 True 206 lncRNA 0.46 1 31976245 31976450

Neighbor

gene id symbol gene type direction distance location
inhbaa LOC106590082 coding upstream 2234 31962835 ~ 31974011 (+)
LOC110490007 LOC106590083 coding upstream 51766 31910786 ~ 31924479 (+)
LOC110490003 cssa29h18orf63 coding upstream 184099 31758726 ~ 31792146 (+)
nrn1a LOC106590090 coding upstream 528747 31441494 ~ 31447498 (+)
wdr97 LOC106590093 coding upstream 643548 31306646 ~ 31332697 (+)
LOC118938888 NA coding downstream 31671 32008121 ~ 32011745 (+)
LOC110490011 LOC106590060 coding downstream 374355 32350805 ~ 32480547 (+)
LOC118938962 NA coding downstream 956346 32932796 ~ 32932850 (+)
LOC110490013 LOC106590056 coding downstream 1037756 33014206 ~ 33016968 (+)
LOC110490956 drosha coding downstream 1123431 33099881 ~ 33262044 (+)
G1281447 NA non-coding upstream 17 31975870 ~ 31976228 (+)
G1281433 LOC106579309 non-coding upstream 21319 31954564 ~ 31954926 (+)
G1281432 NA non-coding upstream 21799 31954026 ~ 31954446 (+)
G1281428 NA non-coding upstream 24919 31951068 ~ 31951326 (+)
G1281423 NA non-coding upstream 29670 31946357 ~ 31946575 (+)
G1281450 NA non-coding downstream 3907 31980357 ~ 31980734 (+)
G1281461 NA non-coding downstream 18879 31995329 ~ 31995593 (+)
G1281623 NA non-coding downstream 144513 32120963 ~ 32121903 (+)
G1281830 NA non-coding downstream 429068 32405518 ~ 32405839 (+)
G1281868 NA non-coding downstream 485134 32461584 ~ 32461989 (+)
G1279833 NA other upstream 1028915 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 1568228 30395817 ~ 30416375 (+)
G1279349 NA other upstream 1672826 30303033 ~ 30303419 (+)
G1277279 NA other upstream 3160435 28815366 ~ 28815810 (+)
G1277159 NA other upstream 3352027 28574316 ~ 28624218 (+)
G1281462 NA other downstream 19717 31996167 ~ 31996513 (+)
G1282302 NA other downstream 711108 32687558 ~ 32698036 (+)
G1284354 NA other downstream 2135357 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 4059133 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 4532628 36509078 ~ 36510512 (+)

Expression


Co-expression Network