G1281868


Basic Information

Item Value
gene id G1281868
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 32461584 ~ 32461989 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1463706
gttacagggaatacatcctcctccctcatgtgatacccttcctgcaggctcatcctgacacgacactccagcatgacaatgccaccagccatactgctcgttctgtgtgtgatttcctgcaagacaggaatgtcagtgttctgccatggccagcgaataaCCCAcaactcaatcccattgagcatgtctgggacctgttggatcggagggtgagggccattctacccagaaatgtccgggaacttgcaggtgccttggtggaagagtggggtaacatctcagagcaagaactggcaaatctggtgcagtccatgaggaggagatgcactgcagtacttaatgcagctggtggtcacaccagatactgactgttacttttgattttgaccccaccttgttcagggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1463706 True 406 lncRNA 0.51 1 32461584 32461989

Neighbor

gene id symbol gene type direction distance location
LOC118938888 NA coding upstream 449839 32008121 ~ 32011745 (+)
inhbaa LOC106590082 coding upstream 487573 31962835 ~ 31974011 (+)
LOC110490007 LOC106590083 coding upstream 537105 31910786 ~ 31924479 (+)
LOC110490003 cssa29h18orf63 coding upstream 669438 31758726 ~ 31792146 (+)
nrn1a LOC106590090 coding upstream 1014086 31441494 ~ 31447498 (+)
LOC118938962 NA coding downstream 470807 32932796 ~ 32932850 (+)
LOC110490013 LOC106590056 coding downstream 552217 33014206 ~ 33016968 (+)
LOC110490956 drosha coding downstream 637892 33099881 ~ 33262044 (+)
LOC110490016 LOC106590054 coding downstream 1815032 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 2161925 34623914 ~ 34822015 (+)
G1281830 NA non-coding upstream 55745 32405518 ~ 32405839 (+)
G1281623 NA non-coding upstream 339681 32120963 ~ 32121903 (+)
G1281461 NA non-coding upstream 465991 31995329 ~ 31995593 (+)
G1281450 NA non-coding upstream 480850 31980357 ~ 31980734 (+)
G1281448 NA non-coding upstream 485134 31976245 ~ 31976450 (+)
LOC110490011 LOC106590060 non-coding downstream 14935 32350805 ~ 32480547 (+)
G1281792 NA non-coding downstream 19892 32481881 ~ 32482322 (+)
G1282223 NA non-coding downstream 62147 32524136 ~ 32524326 (+)
G1282230 NA non-coding downstream 64995 32526984 ~ 32527247 (+)
G1282232 NA non-coding downstream 65356 32527345 ~ 32527558 (+)
G1281462 NA other upstream 465071 31996167 ~ 31996513 (+)
G1279833 NA other upstream 1514254 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 2053567 30395817 ~ 30416375 (+)
G1279349 NA other upstream 2158165 30303033 ~ 30303419 (+)
G1277279 NA other upstream 3645774 28815366 ~ 28815810 (+)
G1282302 NA other downstream 225569 32687558 ~ 32698036 (+)
G1284354 NA other downstream 1649818 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 3573594 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 4047089 36509078 ~ 36510512 (+)
G1289491 NA other downstream 5721447 38183436 ~ 38184003 (+)

Expression


Co-expression Network