G1282230


Basic Information

Item Value
gene id G1282230
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 32526984 ~ 32527247 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1464090
gattatcagtggtcttgaatgtcttccatttcctaataatttctcccacagttgatttcttcaaaccaagctgcttacctattgcagattcagtcttcccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggagtttggagtgtgactgtttgaggttgtggacaggtgtcttttatactgataacaggtaacgagtggaggacagaggagcctcttaaagaagaagt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1464090 True 264 lncRNA 0.43 1 32526984 32527247

Neighbor

gene id symbol gene type direction distance location
LOC110490011 LOC106590060 coding upstream 46995 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 515239 32008121 ~ 32011745 (+)
inhbaa LOC106590082 coding upstream 552973 31962835 ~ 31974011 (+)
LOC110490007 LOC106590083 coding upstream 602505 31910786 ~ 31924479 (+)
LOC110490003 cssa29h18orf63 coding upstream 734838 31758726 ~ 31792146 (+)
LOC118938962 NA coding downstream 405549 32932796 ~ 32932850 (+)
LOC110490013 LOC106590056 coding downstream 486959 33014206 ~ 33016968 (+)
LOC110490956 drosha coding downstream 572634 33099881 ~ 33262044 (+)
LOC110490016 LOC106590054 coding downstream 1749774 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 2096667 34623914 ~ 34822015 (+)
G1282223 NA non-coding upstream 2658 32524136 ~ 32524326 (+)
G1281792 NA non-coding upstream 44662 32481881 ~ 32482322 (+)
G1281868 NA non-coding upstream 64995 32461584 ~ 32461989 (+)
G1281830 NA non-coding upstream 121145 32405518 ~ 32405839 (+)
G1282232 NA non-coding downstream 98 32527345 ~ 32527558 (+)
G1282248 NA non-coding downstream 14265 32541512 ~ 32541751 (+)
G1282302 NA non-coding downstream 160311 32687558 ~ 32698036 (+)
G1282701 NA non-coding downstream 358450 32885697 ~ 32885944 (+)
G1282710 NA non-coding downstream 368848 32896095 ~ 32902355 (+)
G1281462 NA other upstream 530471 31996167 ~ 31996513 (+)
G1279833 NA other upstream 1579654 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 2118967 30395817 ~ 30416375 (+)
G1279349 NA other upstream 2223565 30303033 ~ 30303419 (+)
G1277279 NA other upstream 3711174 28815366 ~ 28815810 (+)
G1284354 NA other downstream 1584560 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 3508336 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 3981831 36509078 ~ 36510512 (+)
G1289491 NA other downstream 5656189 38183436 ~ 38184003 (+)

Expression


Co-expression Network