G1282232


Basic Information

Item Value
gene id G1282232
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 32527345 ~ 32527558 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1464092
caatgtgattttctggatttttttccctcattttgtctgtcatggttgaagtgtacctatgatcaaaattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtatatgacctgtaactcagtaaaacaaattgaaattgttgcatgtatcAGTCAAATGTATGTTTAGTAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1464092 True 214 lncRNA 0.35 1 32527345 32527558

Neighbor

gene id symbol gene type direction distance location
LOC110490011 LOC106590060 coding upstream 47356 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 515600 32008121 ~ 32011745 (+)
inhbaa LOC106590082 coding upstream 553334 31962835 ~ 31974011 (+)
LOC110490007 LOC106590083 coding upstream 602866 31910786 ~ 31924479 (+)
LOC110490003 cssa29h18orf63 coding upstream 735199 31758726 ~ 31792146 (+)
LOC118938962 NA coding downstream 405238 32932796 ~ 32932850 (+)
LOC110490013 LOC106590056 coding downstream 486648 33014206 ~ 33016968 (+)
LOC110490956 drosha coding downstream 572323 33099881 ~ 33262044 (+)
LOC110490016 LOC106590054 coding downstream 1749463 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 2096356 34623914 ~ 34822015 (+)
G1282230 NA non-coding upstream 98 32526984 ~ 32527247 (+)
G1282223 NA non-coding upstream 3019 32524136 ~ 32524326 (+)
G1281792 NA non-coding upstream 45023 32481881 ~ 32482322 (+)
G1281868 NA non-coding upstream 65356 32461584 ~ 32461989 (+)
G1282248 NA non-coding downstream 13954 32541512 ~ 32541751 (+)
G1282302 NA non-coding downstream 160000 32687558 ~ 32698036 (+)
G1282701 NA non-coding downstream 358139 32885697 ~ 32885944 (+)
G1282710 NA non-coding downstream 368537 32896095 ~ 32902355 (+)
G1282734 NA non-coding downstream 391477 32919035 ~ 32919410 (+)
G1281462 NA other upstream 530832 31996167 ~ 31996513 (+)
G1279833 NA other upstream 1580015 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 2119328 30395817 ~ 30416375 (+)
G1279349 NA other upstream 2223926 30303033 ~ 30303419 (+)
G1277279 NA other upstream 3711535 28815366 ~ 28815810 (+)
G1284354 NA other downstream 1584249 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 3508025 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 3981520 36509078 ~ 36510512 (+)
G1289491 NA other downstream 5655878 38183436 ~ 38184003 (+)

Expression


Co-expression Network