G1282302


Basic Information

Item Value
gene id G1282302
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 32687558 ~ 32698036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1464164
agaagtagttggtgaaccaggcgaggcaatcatttgagaaaccaaggctgttgagtctgccgatgaggatgtggtgattgacagagtcgaaagccttggccagatcaatgaatacggctgcacagtattgtttcttatcgatggcggttaagatatcatttaggaccttgagcgtggctgaggtgcacccatgaccagctctgaaaccagattgcatagcagagaaggtatggtgagattcgaaatggtcggtaatctgtttgttgacttggctttcgaagaccttagaaaggcatggtaggatagatataggtctgtagcagtttgggtcaagagtgtccccccctttgaagagggggatgaccgcagctgctttccaatctttgggaatctcagacgacatgaaagagaggttgaacaggctagtaataggggtggcaacaatttcggcagataattttagaaagaaagggtccagattgtctagcccggctgatttgtaggggtccagattttgcagctctttcagaacatcagctgaatggatttgggagaaggagaaatggggaaggcttgggcgagttgctgttgggggtgcagtgctgttgacaggggtaggagtagccaggtggaaagcatggccagccgtagaaaaatgcttattgaaattctcaattatggtggatttatcagtggtgacagtgtttcctatcttcagtgcagtgggcagctgggaggaggtgttcttattctccatggactttacagtgtcccagaacttttttgagttagtgttgcaagaagcaaatttctgcttgaaaaagctagccttggcttttctaactgcctgtgtataatggtttctagcttccctgaacagctgcatatcacgggggctgttcgatgctaatgcagaacgccatcggatgtttttgtgttggttaagggcagtcaggtctgtggagaaccaagggctatatctgttcctggttctacatttcttgaatggggcatgtttatttaagatggttaggaaggcatttaaaaaaaatatccaggcatcctctactgacgggatgagatcaatatccttccaggataccccggccaggtcgattagaaaggcctgctcgctgaagtgtttcagggagcgtttgacagtgatgagtggaggtcctTTGactgctgacccattacggatgcaggcaatgaggcagtgatcgctgagatcttggttgaagacagcagaggtgtatttagagg
>TU1464166
agaagtagttggtgaaccaggcgaggcaatcatttgagaaaccaaggctgttgagtctgccgatgaggatgtggtgattgacagagtcgaaagccttggccagatcaatgaatacggctgcacagtattgtttcttatcgatggcggttaagatatcatttaggaccttgagcgtggctgaggtgcacccatgaccagctctgaaaccagattgcatagcagagaaggtatggtgagattcgaaatggtcggtaatctgtttgttgacttggctttcgaagaccttagaaaggcatggtaggatagatataggtctgtagcagtttgggtcaagagtgtccccccctttgaagagggggatgaccgcagctgctttccaatctttgggaatctcagacgacacgaaagagaggttgaacaggctagtaataggggcggcaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1464164 False 1263 TUCP 0.47 2 32687558 32698036
TU1464166 True 442 lncRNA 0.48 2 32687558 32697219

Neighbor

gene id symbol gene type direction distance location
LOC110490011 LOC106590060 coding upstream 207569 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 675813 32008121 ~ 32011745 (+)
inhbaa LOC106590082 coding upstream 713547 31962835 ~ 31974011 (+)
LOC110490007 LOC106590083 coding upstream 763079 31910786 ~ 31924479 (+)
LOC110490003 cssa29h18orf63 coding upstream 895412 31758726 ~ 31792146 (+)
LOC118938962 NA coding downstream 235577 32932796 ~ 32932850 (+)
LOC110490013 LOC106590056 coding downstream 316987 33014206 ~ 33016968 (+)
LOC110490956 drosha coding downstream 402662 33099881 ~ 33262044 (+)
LOC110490016 LOC106590054 coding downstream 1579802 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 1926695 34623914 ~ 34822015 (+)
G1282248 NA non-coding upstream 145807 32541512 ~ 32541751 (+)
G1282232 NA non-coding upstream 160000 32527345 ~ 32527558 (+)
G1282230 NA non-coding upstream 160311 32526984 ~ 32527247 (+)
G1282223 NA non-coding upstream 163232 32524136 ~ 32524326 (+)
G1281792 NA non-coding upstream 205236 32481881 ~ 32482322 (+)
G1282701 NA non-coding downstream 188478 32885697 ~ 32885944 (+)
G1282710 NA non-coding downstream 198876 32896095 ~ 32902355 (+)
G1282734 NA non-coding downstream 221816 32919035 ~ 32919410 (+)
G1282749 NA non-coding downstream 236511 32933730 ~ 32933937 (+)
G1282756 NA non-coding downstream 242132 32939351 ~ 32939605 (+)
G1281462 NA other upstream 691045 31996167 ~ 31996513 (+)
G1279833 NA other upstream 1740228 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 2279541 30395817 ~ 30416375 (+)
G1279349 NA other upstream 2384139 30303033 ~ 30303419 (+)
G1277279 NA other upstream 3871748 28815366 ~ 28815810 (+)
G1284354 NA other downstream 1414588 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 3338364 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 3811859 36509078 ~ 36510512 (+)
G1289491 NA other downstream 5486217 38183436 ~ 38184003 (+)
G1289710 NA other downstream 5897661 38594880 ~ 38600241 (+)

Expression


Co-expression Network