G1282749


Basic Information

Item Value
gene id G1282749
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 32933730 ~ 32933937 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1464624
CATCAAGAGCCACACAGGTGCATCTTTTAACACTACAGTTTGCTGCTCCTTTACTTTTCAACCATCTCGGTTACGTGCTTTTCAACAGTTCTGGCAGACAGGCTTTTATCTTTGAGATGATTGTGTCTTTGTTAGGAAATCCATCAAATAAAGCCTGTGAACTACTGAGGAAAGTCTCCTTGATATATATTCCCCATCAGTAAATGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1464624 True 208 lncRNA 0.40 1 32933730 32933937

Neighbor

gene id symbol gene type direction distance location
LOC118938962 NA coding upstream 880 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 453741 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 921985 32008121 ~ 32011745 (+)
inhbaa LOC106590082 coding upstream 959719 31962835 ~ 31974011 (+)
LOC110490007 LOC106590083 coding upstream 1009251 31910786 ~ 31924479 (+)
LOC110490013 LOC106590056 coding downstream 80269 33014206 ~ 33016968 (+)
LOC110490956 drosha coding downstream 165944 33099881 ~ 33262044 (+)
LOC110490016 LOC106590054 coding downstream 1343084 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 1689977 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 2058486 34992423 ~ 35361339 (+)
G1282734 NA non-coding upstream 14320 32919035 ~ 32919410 (+)
G1282710 NA non-coding upstream 31375 32896095 ~ 32902355 (+)
G1282701 NA non-coding upstream 47786 32885697 ~ 32885944 (+)
G1282302 NA non-coding upstream 236511 32687558 ~ 32698036 (+)
G1282248 NA non-coding upstream 391979 32541512 ~ 32541751 (+)
G1282756 NA non-coding downstream 5414 32939351 ~ 32939605 (+)
G1282764 NA non-coding downstream 15925 32949862 ~ 32950159 (+)
G1282778 NA non-coding downstream 27488 32961425 ~ 32961627 (+)
G1282791 NA non-coding downstream 34561 32968498 ~ 32968768 (+)
G1282798 NA non-coding downstream 37768 32971705 ~ 32971907 (+)
G1281462 NA other upstream 937217 31996167 ~ 31996513 (+)
G1279833 NA other upstream 1986400 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 2525713 30395817 ~ 30416375 (+)
G1279349 NA other upstream 2630311 30303033 ~ 30303419 (+)
G1284354 NA other downstream 1177870 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 3101646 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 3575141 36509078 ~ 36510512 (+)
G1289491 NA other downstream 5249499 38183436 ~ 38184003 (+)
G1289710 NA other downstream 5660943 38594880 ~ 38600241 (+)

Expression


Co-expression Network