G1282791


Basic Information

Item Value
gene id G1282791
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 32968498 ~ 32968768 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1464666
gtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatgtttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatgcgactgattgttgtcctatggacagagtctcccac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1464666 True 271 lncRNA 0.42 1 32968498 32968768

Neighbor

gene id symbol gene type direction distance location
LOC118938962 NA coding upstream 35648 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 488509 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 956753 32008121 ~ 32011745 (+)
inhbaa LOC106590082 coding upstream 994487 31962835 ~ 31974011 (+)
LOC110490007 LOC106590083 coding upstream 1044019 31910786 ~ 31924479 (+)
LOC110490013 LOC106590056 coding downstream 45438 33014206 ~ 33016968 (+)
LOC110490956 drosha coding downstream 131113 33099881 ~ 33262044 (+)
LOC110490016 LOC106590054 coding downstream 1308253 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 1655146 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 2023655 34992423 ~ 35361339 (+)
G1282778 NA non-coding upstream 6871 32961425 ~ 32961627 (+)
G1282764 NA non-coding upstream 18339 32949862 ~ 32950159 (+)
G1282756 NA non-coding upstream 28893 32939351 ~ 32939605 (+)
G1282749 NA non-coding upstream 34561 32933730 ~ 32933937 (+)
G1282734 NA non-coding upstream 49088 32919035 ~ 32919410 (+)
G1282798 NA non-coding downstream 2937 32971705 ~ 32971907 (+)
G1282807 NA non-coding downstream 6463 32975231 ~ 32975616 (+)
G1282845 NA non-coding downstream 37407 33006175 ~ 33006389 (+)
G1282871 NA non-coding downstream 63705 33032473 ~ 33032808 (+)
G1282302 NA other upstream 270462 32687558 ~ 32698036 (+)
G1281462 NA other upstream 971985 31996167 ~ 31996513 (+)
G1279833 NA other upstream 2021168 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 2560481 30395817 ~ 30416375 (+)
G1279349 NA other upstream 2665079 30303033 ~ 30303419 (+)
G1284354 NA other downstream 1143039 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 3066815 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 3540310 36509078 ~ 36510512 (+)
G1289491 NA other downstream 5214668 38183436 ~ 38184003 (+)
G1289710 NA other downstream 5626112 38594880 ~ 38600241 (+)

Expression


Co-expression Network