G1283020


Basic Information

Item Value
gene id G1283020
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 33137919 ~ 33138178 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1464905
GGTCTAGGGCGGTTTGTCACAGCATCatctgagcttgttgtcattgcaggcaatctcaacgctgtgcgctACTGGGAAAACATCCTACTTCCTCATgtgatacccttcctgcaggctcatcctgacatgaccctgcagcatgacaatgccaacagccatactgcttgttctgtgtgtgatttcctgcaagacaggaatgtcagtgttctgcaatggccagcgaagatcccggatctcaatcccattgagcatatcttgga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1464905 True 260 lncRNA 0.50 1 33137919 33138178

Neighbor

gene id symbol gene type direction distance location
LOC110490013 LOC106590056 coding upstream 120962 33014206 ~ 33016968 (+)
LOC118938962 NA coding upstream 205069 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 657930 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 1126174 32008121 ~ 32011745 (+)
inhbaa LOC106590082 coding upstream 1163908 31962835 ~ 31974011 (+)
LOC110490016 LOC106590054 coding downstream 1138843 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 1485736 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 1854245 34992423 ~ 35361339 (+)
LOC118938916 NA coding downstream 2478646 35616824 ~ 35619520 (+)
LOC110490019 LOC106578561 coding downstream 2598204 35736382 ~ 35815615 (+)
G1282871 NA non-coding upstream 105111 33032473 ~ 33032808 (+)
G1282845 NA non-coding upstream 131530 33006175 ~ 33006389 (+)
G1282807 NA non-coding upstream 162303 32975231 ~ 32975616 (+)
G1282798 NA non-coding upstream 166012 32971705 ~ 32971907 (+)
G1283025 NA non-coding downstream 2266 33140444 ~ 33140718 (+)
G1283037 NA non-coding downstream 8834 33147012 ~ 33147224 (+)
G1283041 NA non-coding downstream 10211 33148389 ~ 33148910 (+)
G1283117 NA non-coding downstream 77189 33215367 ~ 33215666 (+)
G1283159 NA non-coding downstream 108386 33246564 ~ 33246823 (+)
G1282302 NA other upstream 439883 32687558 ~ 32698036 (+)
G1281462 NA other upstream 1141406 31996167 ~ 31996513 (+)
G1279833 NA other upstream 2190589 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 2729902 30395817 ~ 30416375 (+)
G1279349 NA other upstream 2834500 30303033 ~ 30303419 (+)
G1284354 NA other downstream 973629 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 2897405 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 3370900 36509078 ~ 36510512 (+)
G1289491 NA other downstream 5045258 38183436 ~ 38184003 (+)
G1289710 NA other downstream 5456702 38594880 ~ 38600241 (+)

Expression


Co-expression Network