G1283025


Basic Information

Item Value
gene id G1283025
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 33140444 ~ 33140718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1464910
caaagaaaaagccatctctCAGACAGGCCAATCAAAattaaagattaagatgggcagacGAACACAGacacaactctgcctagaaggccagcatccttgagtcgcctcttcgctgttgacattgagactggtgttttgcgggtactatttaatgaagctgccagctgaggacttgtgaagcgtctgtttccaaaactagacactctaatgtacttgtcctcttgctcagttgtgcaccggggcctcccactcctatttctattctggttagggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1464910 True 275 lncRNA 0.47 1 33140444 33140718

Neighbor

gene id symbol gene type direction distance location
LOC110490013 LOC106590056 coding upstream 123487 33014206 ~ 33016968 (+)
LOC118938962 NA coding upstream 207594 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 660455 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 1128699 32008121 ~ 32011745 (+)
inhbaa LOC106590082 coding upstream 1166433 31962835 ~ 31974011 (+)
LOC110490016 LOC106590054 coding downstream 1136303 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 1483196 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 1851705 34992423 ~ 35361339 (+)
LOC118938916 NA coding downstream 2476106 35616824 ~ 35619520 (+)
LOC110490019 LOC106578561 coding downstream 2595664 35736382 ~ 35815615 (+)
G1283020 NA non-coding upstream 2266 33137919 ~ 33138178 (+)
G1282871 NA non-coding upstream 107636 33032473 ~ 33032808 (+)
G1282845 NA non-coding upstream 134055 33006175 ~ 33006389 (+)
G1282807 NA non-coding upstream 164828 32975231 ~ 32975616 (+)
G1283037 NA non-coding downstream 6294 33147012 ~ 33147224 (+)
G1283041 NA non-coding downstream 7671 33148389 ~ 33148910 (+)
G1283117 NA non-coding downstream 74649 33215367 ~ 33215666 (+)
G1283159 NA non-coding downstream 105846 33246564 ~ 33246823 (+)
G1283172 LOC106590055 non-coding downstream 121887 33262605 ~ 33268078 (+)
G1282302 NA other upstream 442408 32687558 ~ 32698036 (+)
G1281462 NA other upstream 1143931 31996167 ~ 31996513 (+)
G1279833 NA other upstream 2193114 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 2732427 30395817 ~ 30416375 (+)
G1279349 NA other upstream 2837025 30303033 ~ 30303419 (+)
G1284354 NA other downstream 971089 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 2894865 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 3368360 36509078 ~ 36510512 (+)
G1289491 NA other downstream 5042718 38183436 ~ 38184003 (+)
G1289710 NA other downstream 5454162 38594880 ~ 38600241 (+)

Expression


Co-expression Network