Gene
RNA
| Item | Value |
|---|---|
| gene id | G1283335 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 33361012 ~ 33361285 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1465248 | True | 274 | lncRNA | 0.38 | 1 | 33361012 | 33361285 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490956 | drosha | coding | upstream | 98968 | 33099881 ~ 33262044 (+) |
| LOC110490013 | LOC106590056 | coding | upstream | 344055 | 33014206 ~ 33016968 (+) |
| LOC118938962 | NA | coding | upstream | 428162 | 32932796 ~ 32932850 (+) |
| LOC110490011 | LOC106590060 | coding | upstream | 881023 | 32350805 ~ 32480547 (+) |
| LOC118938888 | NA | coding | upstream | 1349267 | 32008121 ~ 32011745 (+) |
| LOC110490016 | LOC106590054 | coding | downstream | 915736 | 34277021 ~ 34325910 (+) |
| LOC110490017 | LOC106590053 | coding | downstream | 1262629 | 34623914 ~ 34822015 (+) |
| LOC110490018 | LOC106578564 | coding | downstream | 1631138 | 34992423 ~ 35361339 (+) |
| LOC118938916 | NA | coding | downstream | 2255539 | 35616824 ~ 35619520 (+) |
| LOC110490019 | LOC106578561 | coding | downstream | 2375097 | 35736382 ~ 35815615 (+) |
| G1283172 | LOC106590055 | non-coding | upstream | 92934 | 33262605 ~ 33268078 (+) |
| G1283159 | NA | non-coding | upstream | 114189 | 33246564 ~ 33246823 (+) |
| G1283117 | NA | non-coding | upstream | 145346 | 33215367 ~ 33215666 (+) |
| G1283041 | NA | non-coding | upstream | 212102 | 33148389 ~ 33148910 (+) |
| G1283037 | NA | non-coding | upstream | 213788 | 33147012 ~ 33147224 (+) |
| G1283338 | NA | non-coding | downstream | 2232 | 33363517 ~ 33363845 (+) |
| G1283350 | NA | non-coding | downstream | 8442 | 33369727 ~ 33369963 (+) |
| G1283355 | NA | non-coding | downstream | 9993 | 33371278 ~ 33371783 (+) |
| G1283372 | NA | non-coding | downstream | 24728 | 33386013 ~ 33386276 (+) |
| G1283390 | LOC106577669 | non-coding | downstream | 34340 | 33395625 ~ 33396135 (+) |
| G1282302 | NA | other | upstream | 662976 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 1364499 | 31996167 ~ 31996513 (+) |
| G1279833 | NA | other | upstream | 2413682 | 30944171 ~ 30947330 (+) |
| htr5ab | htr5a | other | upstream | 2952995 | 30395817 ~ 30416375 (+) |
| G1279349 | NA | other | upstream | 3057593 | 30303033 ~ 30303419 (+) |
| G1284354 | NA | other | downstream | 750522 | 34111807 ~ 34112271 (+) |
| G1286648 | LOC106590042 | other | downstream | 2674298 | 36035583 ~ 36093396 (+) |
| G1287489 | LOC106590045 | other | downstream | 3147793 | 36509078 ~ 36510512 (+) |
| G1289491 | NA | other | downstream | 4822151 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 5233595 | 38594880 ~ 38600241 (+) |
