G1283355


Basic Information

Item Value
gene id G1283355
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 33371278 ~ 33371783 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1465268
cagcatcagactggccttcagcaaatgacattttgggtatacaatgacggatttaatcgggaaaaagacccaattgtgatgtttatgggacatataggagtgccaacaaagaagctcgtccaaggtaatgaatgttttatattttatttctgcgttttgggtagcgccggctaccgcaaaatctgttgtttacgtgtcgtgctggtattttgggggagtgcatgctatcagataatagcttctcatgctttcgctgaaaagcattttacaaatctgacttggtggctagattcacaacgagtgtagctttaattcagtaccttgcatgtgtatttttatgaaagtttgagatttatcgagtactatactcaagtactataggtggcgctctgaaatttccgctgagcggtccctgtgcagggaccacctcgATATTAATGGACAATAAgtgcctttctttcaaaaacaaggacatttctaagtgatcccaaacttttgaattgtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1465268 True 506 lncRNA 0.41 1 33371278 33371783

Neighbor

gene id symbol gene type direction distance location
LOC110490956 drosha coding upstream 109234 33099881 ~ 33262044 (+)
LOC110490013 LOC106590056 coding upstream 354321 33014206 ~ 33016968 (+)
LOC118938962 NA coding upstream 438428 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 891289 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 1359533 32008121 ~ 32011745 (+)
LOC110490016 LOC106590054 coding downstream 905238 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 1252131 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 1620640 34992423 ~ 35361339 (+)
LOC118938916 NA coding downstream 2245041 35616824 ~ 35619520 (+)
LOC110490019 LOC106578561 coding downstream 2364599 35736382 ~ 35815615 (+)
G1283350 NA non-coding upstream 1315 33369727 ~ 33369963 (+)
G1283338 NA non-coding upstream 7433 33363517 ~ 33363845 (+)
G1283335 NA non-coding upstream 9993 33361012 ~ 33361285 (+)
G1283172 LOC106590055 non-coding upstream 103200 33262605 ~ 33268078 (+)
G1283159 NA non-coding upstream 124455 33246564 ~ 33246823 (+)
G1283372 NA non-coding downstream 14230 33386013 ~ 33386276 (+)
G1283390 LOC106577669 non-coding downstream 23842 33395625 ~ 33396135 (+)
G1283423 NA non-coding downstream 46514 33418297 ~ 33418751 (+)
G1283424 LOC107579696 non-coding downstream 52950 33424733 ~ 33425162 (+)
G1283437 NA non-coding downstream 65049 33436832 ~ 33437077 (+)
G1282302 NA other upstream 673242 32687558 ~ 32698036 (+)
G1281462 NA other upstream 1374765 31996167 ~ 31996513 (+)
G1279833 NA other upstream 2423948 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 2963261 30395817 ~ 30416375 (+)
G1279349 NA other upstream 3067859 30303033 ~ 30303419 (+)
G1284354 NA other downstream 740024 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 2663800 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 3137295 36509078 ~ 36510512 (+)
G1289491 NA other downstream 4811653 38183436 ~ 38184003 (+)
G1289710 NA other downstream 5223097 38594880 ~ 38600241 (+)

Expression


Co-expression Network