G1284126


Basic Information

Item Value
gene id G1284126
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 33960279 ~ 33960651 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1466058
GTCATGACTCTCTCTCCTTGGTGAGGATCAAAGGTGCCAGATCAGCTTGACACATGTTTGAAGATCCCTCTTTCCCACAGAAGAGTGTGCCGGTCTTGATATCTTAACACTGGGTCGTAAATTTAAGCCACATGGTACTTTCCCACTCTGCCTTTCAGTATCCTCCAAAGGAATGCTTTGTCTAGAGTGTGGCCCGCCTAAAACCTCTGTAAAAAGATTGGACATTGAAACAGTATTTCTAACATAAAGAATGTTGGGAATGATGAGAGATGGAATATGGAAAATGAAtctctattttgtgatgtcattaaaatgatCAGAAAGACGTTATAACGGAAACATTAACTTTAAAAGCTTTCGCACTGTATATATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1466058 True 373 lncRNA 0.39 1 33960279 33960651

Neighbor

gene id symbol gene type direction distance location
LOC110490956 drosha coding upstream 698235 33099881 ~ 33262044 (+)
LOC110490013 LOC106590056 coding upstream 943322 33014206 ~ 33016968 (+)
LOC118938962 NA coding upstream 1027429 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 1480290 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 1948534 32008121 ~ 32011745 (+)
LOC110490016 LOC106590054 coding downstream 316370 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 663263 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 1031772 34992423 ~ 35361339 (+)
LOC118938916 NA coding downstream 1656173 35616824 ~ 35619520 (+)
LOC110490019 LOC106578561 coding downstream 1775731 35736382 ~ 35815615 (+)
G1284039 NA non-coding upstream 63076 33896803 ~ 33897203 (+)
G1283986 NA non-coding upstream 112564 33847497 ~ 33847715 (+)
G1283673 NA non-coding upstream 347279 33612796 ~ 33613000 (+)
G1283663 NA non-coding upstream 352350 33607684 ~ 33607929 (+)
G1283657 NA non-coding upstream 355129 33604908 ~ 33605150 (+)
G1284149 NA non-coding downstream 13644 33974295 ~ 33974838 (+)
G1284190 NA non-coding downstream 35672 33996323 ~ 33996653 (+)
G1284197 NA non-coding downstream 41293 34001944 ~ 34002145 (+)
G1284257 LOC105030512 non-coding downstream 79661 34040312 ~ 34040612 (+)
G1284260 NA non-coding downstream 82610 34043261 ~ 34043473 (+)
G1282302 NA other upstream 1262243 32687558 ~ 32698036 (+)
G1281462 NA other upstream 1963766 31996167 ~ 31996513 (+)
G1279833 NA other upstream 3012949 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 3552262 30395817 ~ 30416375 (+)
G1279349 NA other upstream 3656860 30303033 ~ 30303419 (+)
G1284354 NA other downstream 151156 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 2074932 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 2548427 36509078 ~ 36510512 (+)
G1289491 NA other downstream 4222785 38183436 ~ 38184003 (+)
G1289710 NA other downstream 4634229 38594880 ~ 38600241 (+)

Expression


Co-expression Network