G1284149


Basic Information

Item Value
gene id G1284149
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 33974295 ~ 33974838 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1466081
gggtcgtgcctgggtcttccagcatgacaacgacccgaaacacacagccagggcaactaaggagtggctccataagaagcatctcaaggtcctggagtggcctagccagtctccagacctgaactcaATAGAAAACATTTGTAGGGAGCTGAAAGTACATATTGcacagcgacagccccgaaatctgaaggatctggagaaggtctgtatggaggactgggccaaaatccctgctgcagtgtgtgcaaacctggtcaagaactacaggaaacgtatgatctctgtaattacaaacaaaggtttctgtaccaaattgtaagttctgcttttctgatgtatcacatacttatgtcatgcaataaaatgcaaatgaattacttaaaaatcatacaatgtgattttgagaatttttgttttagattccgtctctcatagttgatgtgtacctatgataaaaaattacagacctctacatgctttgtaagtaggaaaacctgcaaaatcggcagtgtatcaaatacagtacttgttctccccactgtat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1466081 True 544 lncRNA 0.42 1 33974295 33974838

Neighbor

gene id symbol gene type direction distance location
LOC110490956 drosha coding upstream 712251 33099881 ~ 33262044 (+)
LOC110490013 LOC106590056 coding upstream 957338 33014206 ~ 33016968 (+)
LOC118938962 NA coding upstream 1041445 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 1494306 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 1962550 32008121 ~ 32011745 (+)
LOC110490016 LOC106590054 coding downstream 302183 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 649076 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 1017585 34992423 ~ 35361339 (+)
LOC118938916 NA coding downstream 1641986 35616824 ~ 35619520 (+)
LOC110490019 LOC106578561 coding downstream 1761544 35736382 ~ 35815615 (+)
G1284126 NA non-coding upstream 13644 33960279 ~ 33960651 (+)
G1284039 NA non-coding upstream 77092 33896803 ~ 33897203 (+)
G1283986 NA non-coding upstream 126580 33847497 ~ 33847715 (+)
G1283673 NA non-coding upstream 361295 33612796 ~ 33613000 (+)
G1283663 NA non-coding upstream 366366 33607684 ~ 33607929 (+)
G1284190 NA non-coding downstream 21485 33996323 ~ 33996653 (+)
G1284197 NA non-coding downstream 27106 34001944 ~ 34002145 (+)
G1284257 LOC105030512 non-coding downstream 65474 34040312 ~ 34040612 (+)
G1284260 NA non-coding downstream 68423 34043261 ~ 34043473 (+)
G1284266 NA non-coding downstream 72029 34046867 ~ 34047143 (+)
G1282302 NA other upstream 1276259 32687558 ~ 32698036 (+)
G1281462 NA other upstream 1977782 31996167 ~ 31996513 (+)
G1279833 NA other upstream 3026965 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 3566278 30395817 ~ 30416375 (+)
G1279349 NA other upstream 3670876 30303033 ~ 30303419 (+)
G1284354 NA other downstream 136969 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 2060745 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 2534240 36509078 ~ 36510512 (+)
G1289491 NA other downstream 4208598 38183436 ~ 38184003 (+)
G1289710 NA other downstream 4620042 38594880 ~ 38600241 (+)

Expression


Co-expression Network