Gene
RNA
| Item | Value |
|---|---|
| gene id | G1284190 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 33996323 ~ 33996653 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1466122 | True | 331 | lncRNA | 0.54 | 1 | 33996323 | 33996653 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490956 | drosha | coding | upstream | 734279 | 33099881 ~ 33262044 (+) |
| LOC110490013 | LOC106590056 | coding | upstream | 979366 | 33014206 ~ 33016968 (+) |
| LOC118938962 | NA | coding | upstream | 1063473 | 32932796 ~ 32932850 (+) |
| LOC110490011 | LOC106590060 | coding | upstream | 1516334 | 32350805 ~ 32480547 (+) |
| LOC118938888 | NA | coding | upstream | 1984578 | 32008121 ~ 32011745 (+) |
| LOC110490016 | LOC106590054 | coding | downstream | 280368 | 34277021 ~ 34325910 (+) |
| LOC110490017 | LOC106590053 | coding | downstream | 627261 | 34623914 ~ 34822015 (+) |
| LOC110490018 | LOC106578564 | coding | downstream | 995770 | 34992423 ~ 35361339 (+) |
| LOC118938916 | NA | coding | downstream | 1620171 | 35616824 ~ 35619520 (+) |
| LOC110490019 | LOC106578561 | coding | downstream | 1739729 | 35736382 ~ 35815615 (+) |
| G1284149 | NA | non-coding | upstream | 21485 | 33974295 ~ 33974838 (+) |
| G1284126 | NA | non-coding | upstream | 35672 | 33960279 ~ 33960651 (+) |
| G1284039 | NA | non-coding | upstream | 99120 | 33896803 ~ 33897203 (+) |
| G1283986 | NA | non-coding | upstream | 148608 | 33847497 ~ 33847715 (+) |
| G1283673 | NA | non-coding | upstream | 383323 | 33612796 ~ 33613000 (+) |
| G1284197 | NA | non-coding | downstream | 5291 | 34001944 ~ 34002145 (+) |
| G1284257 | LOC105030512 | non-coding | downstream | 43659 | 34040312 ~ 34040612 (+) |
| G1284260 | NA | non-coding | downstream | 46608 | 34043261 ~ 34043473 (+) |
| G1284266 | NA | non-coding | downstream | 50214 | 34046867 ~ 34047143 (+) |
| G1284280 | NA | non-coding | downstream | 60178 | 34056831 ~ 34057079 (+) |
| G1282302 | NA | other | upstream | 1298287 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 1999810 | 31996167 ~ 31996513 (+) |
| G1279833 | NA | other | upstream | 3048993 | 30944171 ~ 30947330 (+) |
| htr5ab | htr5a | other | upstream | 3588306 | 30395817 ~ 30416375 (+) |
| G1279349 | NA | other | upstream | 3692904 | 30303033 ~ 30303419 (+) |
| G1284354 | NA | other | downstream | 115154 | 34111807 ~ 34112271 (+) |
| G1286648 | LOC106590042 | other | downstream | 2038930 | 36035583 ~ 36093396 (+) |
| G1287489 | LOC106590045 | other | downstream | 2512425 | 36509078 ~ 36510512 (+) |
| G1289491 | NA | other | downstream | 4186783 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 4598227 | 38594880 ~ 38600241 (+) |
