G1284257 (LOC105030512)


Basic Information

Item Value
gene id G1284257
gene name LOC105030512
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 34040312 ~ 34040612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1466189
agacaaaaccgtgactcgtcagtgaagagcactttttgccagtcctgtctggtccagcgacggtgggtgtGTGCCCGTAGGTGACgtagttgccggtgatgtctggtgaggacttgccttacaacatacctacaagccctcagtccatcctctctcagcctatttctgacaatctgagcactgatggaaggattttgcgttcctggtataactcaggcagttgttgttcccatcctgtacctgtcccgcaggtgtgatgttccgatgtaccgatcctgtgcaggtgttgttacacgtggtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1466189 True 301 lncRNA 0.52 1 34040312 34040612

Neighbor

gene id symbol gene type direction distance location
LOC110490956 drosha coding upstream 778268 33099881 ~ 33262044 (+)
LOC110490013 LOC106590056 coding upstream 1023355 33014206 ~ 33016968 (+)
LOC118938962 NA coding upstream 1107462 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 1560323 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 2028567 32008121 ~ 32011745 (+)
LOC110490016 LOC106590054 coding downstream 236409 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 583302 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 951811 34992423 ~ 35361339 (+)
LOC118938916 NA coding downstream 1576212 35616824 ~ 35619520 (+)
LOC110490019 LOC106578561 coding downstream 1695770 35736382 ~ 35815615 (+)
G1284197 NA non-coding upstream 38167 34001944 ~ 34002145 (+)
G1284190 NA non-coding upstream 43659 33996323 ~ 33996653 (+)
G1284149 NA non-coding upstream 65474 33974295 ~ 33974838 (+)
G1284126 NA non-coding upstream 79661 33960279 ~ 33960651 (+)
G1284039 NA non-coding upstream 143109 33896803 ~ 33897203 (+)
G1284260 NA non-coding downstream 2649 34043261 ~ 34043473 (+)
G1284266 NA non-coding downstream 6255 34046867 ~ 34047143 (+)
G1284280 NA non-coding downstream 16219 34056831 ~ 34057079 (+)
G1284289 NA non-coding downstream 22858 34063470 ~ 34063675 (+)
G1284322 NA non-coding downstream 50164 34090776 ~ 34090993 (+)
G1282302 NA other upstream 1342276 32687558 ~ 32698036 (+)
G1281462 NA other upstream 2043799 31996167 ~ 31996513 (+)
G1279833 NA other upstream 3092982 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 3632295 30395817 ~ 30416375 (+)
G1279349 NA other upstream 3736893 30303033 ~ 30303419 (+)
G1284354 NA other downstream 71195 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 1994971 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 2468466 36509078 ~ 36510512 (+)
G1289491 NA other downstream 4142824 38183436 ~ 38184003 (+)
G1289710 NA other downstream 4554268 38594880 ~ 38600241 (+)

Expression


Co-expression Network