G1284430


Basic Information

Item Value
gene id G1284430
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 34164604 ~ 34164924 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1466364
GGTCagatcattttttaaattttatttcacctatatttaaccaggtaggctagttgagaacaagttctcatttgcaactgtgacctggccaagataaagcatagcaattcgacacagacaacaacacagagttacacatggaataaacaaaacatacagtcaataatactgtagaacaaaagaaaacaaaaagtctatatacagtgcaaatgaggtaagttaaggaaataaatagtcCGTGGTGGCGAAGCAATTcaaatatagcaattaaacactggaatggtagattggcagaagatgaatgtgcaggtagagatactg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1466364 True 321 lncRNA 0.35 1 34164604 34164924

Neighbor

gene id symbol gene type direction distance location
LOC110490956 drosha coding upstream 902560 33099881 ~ 33262044 (+)
LOC110490013 LOC106590056 coding upstream 1147647 33014206 ~ 33016968 (+)
LOC118938962 NA coding upstream 1231754 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 1684615 32350805 ~ 32480547 (+)
LOC118938888 NA coding upstream 2152859 32008121 ~ 32011745 (+)
LOC110490016 LOC106590054 coding downstream 112097 34277021 ~ 34325910 (+)
LOC110490017 LOC106590053 coding downstream 458990 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 827499 34992423 ~ 35361339 (+)
LOC118938916 NA coding downstream 1451900 35616824 ~ 35619520 (+)
LOC110490019 LOC106578561 coding downstream 1571458 35736382 ~ 35815615 (+)
G1284341 NA non-coding upstream 60817 34103324 ~ 34103787 (+)
G1284322 NA non-coding upstream 73611 34090776 ~ 34090993 (+)
G1284289 NA non-coding upstream 100929 34063470 ~ 34063675 (+)
G1284280 NA non-coding upstream 107525 34056831 ~ 34057079 (+)
G1284266 NA non-coding upstream 117461 34046867 ~ 34047143 (+)
G1284527 NA non-coding downstream 61838 34226762 ~ 34227166 (+)
G1284530 NA non-coding downstream 63364 34228288 ~ 34228582 (+)
G1284800 NA non-coding downstream 251803 34416727 ~ 34416964 (+)
G1284957 NA non-coding downstream 361747 34526671 ~ 34527044 (+)
G1284966 NA non-coding downstream 368561 34533485 ~ 34533740 (+)
G1284354 NA other upstream 52333 34111807 ~ 34112271 (+)
G1282302 NA other upstream 1466568 32687558 ~ 32698036 (+)
G1281462 NA other upstream 2168091 31996167 ~ 31996513 (+)
G1279833 NA other upstream 3217274 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 3756587 30395817 ~ 30416375 (+)
G1286648 LOC106590042 other downstream 1870659 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 2344154 36509078 ~ 36510512 (+)
G1289491 NA other downstream 4018512 38183436 ~ 38184003 (+)
G1289710 NA other downstream 4429956 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 4872081 39037005 ~ 39061248 (+)

Expression


Co-expression Network