G1284957


Basic Information

Item Value
gene id G1284957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 34526671 ~ 34527044 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1466903
atatatcactagccactttaaacaatgctaccttatataatgttacttaccctacattattcatctcatatgcatacgtatatactgtactctatatcattgactgtatccttatgtaatacatgtatcactagccactttaactatgccactttgtttacatactcatctcacatgtatatactgtactcgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtacaagacagtagttttggaattgttagttagattacttgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1466903 True 374 lncRNA 0.34 1 34526671 34527044

Neighbor

gene id symbol gene type direction distance location
LOC110490016 LOC106590054 coding upstream 200761 34277021 ~ 34325910 (+)
LOC110490956 drosha coding upstream 1264627 33099881 ~ 33262044 (+)
LOC110490013 LOC106590056 coding upstream 1509714 33014206 ~ 33016968 (+)
LOC118938962 NA coding upstream 1593821 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 2046682 32350805 ~ 32480547 (+)
LOC110490017 LOC106590053 coding downstream 96870 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 465379 34992423 ~ 35361339 (+)
LOC118938916 NA coding downstream 1089780 35616824 ~ 35619520 (+)
LOC110490019 LOC106578561 coding downstream 1209338 35736382 ~ 35815615 (+)
LOC110490020 LOC106590040 coding downstream 1320842 35847886 ~ 35895107 (+)
G1284800 NA non-coding upstream 109707 34416727 ~ 34416964 (+)
G1284530 NA non-coding upstream 298089 34228288 ~ 34228582 (+)
G1284527 NA non-coding upstream 299505 34226762 ~ 34227166 (+)
G1284430 NA non-coding upstream 361747 34164604 ~ 34164924 (+)
G1284341 NA non-coding upstream 422884 34103324 ~ 34103787 (+)
G1284966 NA non-coding downstream 6441 34533485 ~ 34533740 (+)
G1284968 NA non-coding downstream 6940 34533984 ~ 34534317 (+)
G1284970 NA non-coding downstream 9052 34536096 ~ 34536327 (+)
G1284971 NA non-coding downstream 9544 34536588 ~ 34536915 (+)
G1284995 NA non-coding downstream 30561 34557605 ~ 34558139 (+)
G1284354 NA other upstream 414400 34111807 ~ 34112271 (+)
G1282302 NA other upstream 1828635 32687558 ~ 32698036 (+)
G1281462 NA other upstream 2530158 31996167 ~ 31996513 (+)
G1279833 NA other upstream 3579341 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 4118654 30395817 ~ 30416375 (+)
G1286648 LOC106590042 other downstream 1508539 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 1982034 36509078 ~ 36510512 (+)
G1289491 NA other downstream 3656392 38183436 ~ 38184003 (+)
G1289710 NA other downstream 4067836 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 4509961 39037005 ~ 39061248 (+)

Expression


Co-expression Network