Gene
RNA
| Item | Value |
|---|---|
| gene id | G1284966 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 34533485 ~ 34533740 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1466912 | True | 256 | lncRNA | 0.34 | 1 | 34533485 | 34533740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490016 | LOC106590054 | coding | upstream | 207575 | 34277021 ~ 34325910 (+) |
| LOC110490956 | drosha | coding | upstream | 1271441 | 33099881 ~ 33262044 (+) |
| LOC110490013 | LOC106590056 | coding | upstream | 1516528 | 33014206 ~ 33016968 (+) |
| LOC118938962 | NA | coding | upstream | 1600635 | 32932796 ~ 32932850 (+) |
| LOC110490011 | LOC106590060 | coding | upstream | 2053496 | 32350805 ~ 32480547 (+) |
| LOC110490017 | LOC106590053 | coding | downstream | 90174 | 34623914 ~ 34822015 (+) |
| LOC110490018 | LOC106578564 | coding | downstream | 458683 | 34992423 ~ 35361339 (+) |
| LOC118938916 | NA | coding | downstream | 1083084 | 35616824 ~ 35619520 (+) |
| LOC110490019 | LOC106578561 | coding | downstream | 1202642 | 35736382 ~ 35815615 (+) |
| LOC110490020 | LOC106590040 | coding | downstream | 1314146 | 35847886 ~ 35895107 (+) |
| G1284957 | NA | non-coding | upstream | 6441 | 34526671 ~ 34527044 (+) |
| G1284800 | NA | non-coding | upstream | 116521 | 34416727 ~ 34416964 (+) |
| G1284530 | NA | non-coding | upstream | 304903 | 34228288 ~ 34228582 (+) |
| G1284527 | NA | non-coding | upstream | 306319 | 34226762 ~ 34227166 (+) |
| G1284430 | NA | non-coding | upstream | 368561 | 34164604 ~ 34164924 (+) |
| G1284968 | NA | non-coding | downstream | 244 | 34533984 ~ 34534317 (+) |
| G1284970 | NA | non-coding | downstream | 2356 | 34536096 ~ 34536327 (+) |
| G1284971 | NA | non-coding | downstream | 2848 | 34536588 ~ 34536915 (+) |
| G1284995 | NA | non-coding | downstream | 23865 | 34557605 ~ 34558139 (+) |
| G1285006 | NA | non-coding | downstream | 31835 | 34565575 ~ 34565817 (+) |
| G1284354 | NA | other | upstream | 421214 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 1835449 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 2536972 | 31996167 ~ 31996513 (+) |
| G1279833 | NA | other | upstream | 3586155 | 30944171 ~ 30947330 (+) |
| htr5ab | htr5a | other | upstream | 4125468 | 30395817 ~ 30416375 (+) |
| G1286648 | LOC106590042 | other | downstream | 1501843 | 36035583 ~ 36093396 (+) |
| G1287489 | LOC106590045 | other | downstream | 1975338 | 36509078 ~ 36510512 (+) |
| G1289491 | NA | other | downstream | 3649696 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 4061140 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 4503265 | 39037005 ~ 39061248 (+) |
