G1285042


Basic Information

Item Value
gene id G1285042
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 34586988 ~ 34587462 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1466988
Tagtatgttactgatggtaggctttgttactttggtcccagctctctgcaggtcattcactaggtcaccccgtgtggttctgggatttttgctcaccgttcttgtgatccttttgaccccacgggtgagatcttgcgtggagccccagatcgagggagattatcagtggtcttgtatgtcttccatttcctaataattgctcccacagttgatttcttcaaaccaagctgcttacctatcgcagattcagtcttcccagtctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttgattttggccatagtggagtttggagtgggactgtttgaggttgtggacaggtgtcttttatactgataacaagttcaaacagttacccttaatacaggtaatgagtggaggacagaggagcctcttaagaagaagttacaggtctgcgagagccagaaatcgtgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1466988 True 475 lncRNA 0.46 1 34586988 34587462

Neighbor

gene id symbol gene type direction distance location
LOC110490016 LOC106590054 coding upstream 261078 34277021 ~ 34325910 (+)
LOC110490956 drosha coding upstream 1324944 33099881 ~ 33262044 (+)
LOC110490013 LOC106590056 coding upstream 1570031 33014206 ~ 33016968 (+)
LOC118938962 NA coding upstream 1654138 32932796 ~ 32932850 (+)
LOC110490011 LOC106590060 coding upstream 2106999 32350805 ~ 32480547 (+)
LOC110490017 LOC106590053 coding downstream 36452 34623914 ~ 34822015 (+)
LOC110490018 LOC106578564 coding downstream 404961 34992423 ~ 35361339 (+)
LOC118938916 NA coding downstream 1029362 35616824 ~ 35619520 (+)
LOC110490019 LOC106578561 coding downstream 1148920 35736382 ~ 35815615 (+)
LOC110490020 LOC106590040 coding downstream 1260424 35847886 ~ 35895107 (+)
G1285040 NA non-coding upstream 195 34586305 ~ 34586793 (+)
G1285033 NA non-coding upstream 5943 34580812 ~ 34581045 (+)
G1285022 NA non-coding upstream 12839 34573922 ~ 34574149 (+)
G1285006 NA non-coding upstream 21171 34565575 ~ 34565817 (+)
G1284995 NA non-coding upstream 28849 34557605 ~ 34558139 (+)
G1285066 LOC106581475 non-coding downstream 33344 34620806 ~ 34632696 (+)
G1285103 NA non-coding downstream 79281 34666743 ~ 34709912 (+)
G1285471 NA non-coding downstream 275916 34863378 ~ 34863600 (+)
G1285476 NA non-coding downstream 277407 34864869 ~ 34865596 (+)
G1284354 NA other upstream 474717 34111807 ~ 34112271 (+)
G1282302 NA other upstream 1888952 32687558 ~ 32698036 (+)
G1281462 NA other upstream 2590475 31996167 ~ 31996513 (+)
G1279833 NA other upstream 3639658 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 4178971 30395817 ~ 30416375 (+)
G1286648 LOC106590042 other downstream 1448121 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 1921616 36509078 ~ 36510512 (+)
G1289491 NA other downstream 3595974 38183436 ~ 38184003 (+)
G1289710 NA other downstream 4007418 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 4449543 39037005 ~ 39061248 (+)

Expression


Co-expression Network