G1286507


Basic Information

Item Value
gene id G1286507
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 35659948 ~ 35660264 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1468510
CATATAGCTGCAGATGATGCTATGCCTGTTAGCTCTTATGGGAATGAGCTTAATAACCCTTGTGACTTTAAGTCTCATAGTGGGCTTGGGCTAATGAGCCTAAGTGTAttgtactgaggagtggcttccgtctggccactctaccacaaaggcctgattggtggagtgctgcagagatggttgtccttctggaaggttcacccatctccacagaggaactctggagctctatcagagtgaccattgggtccttggtcacatccctgactaaggtccttctcccccagttttggctgggcggccagctctaggaagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1468510 True 317 lncRNA 0.51 1 35659948 35660264

Neighbor

gene id symbol gene type direction distance location
LOC118938916 NA coding upstream 40428 35616824 ~ 35619520 (+)
LOC110490018 LOC106578564 coding upstream 298609 34992423 ~ 35361339 (+)
LOC110490017 LOC106590053 coding upstream 837933 34623914 ~ 34822015 (+)
LOC110490016 LOC106590054 coding upstream 1334038 34277021 ~ 34325910 (+)
LOC110490956 drosha coding upstream 2397904 33099881 ~ 33262044 (+)
LOC110490019 LOC106578561 coding downstream 76118 35736382 ~ 35815615 (+)
LOC110490020 LOC106590040 coding downstream 187622 35847886 ~ 35895107 (+)
LOC110490021 LOC106590041 coding downstream 237010 35897274 ~ 35988249 (+)
LOC110490024 LOC106590043 coding downstream 506243 36166507 ~ 36264082 (+)
LOC110490026 m3k8 coding downstream 963192 36616159 ~ 36635732 (+)
G1286497 NA non-coding upstream 9118 35650506 ~ 35650830 (+)
G1286491 NA non-coding upstream 18036 35641557 ~ 35641912 (+)
G1286440 NA non-coding upstream 62583 35597104 ~ 35597365 (+)
G1286423 NA non-coding upstream 64859 35585864 ~ 35595089 (+)
G1285596 NA non-coding upstream 711122 34948620 ~ 34948826 (+)
G1286508 NA non-coding downstream 423 35660687 ~ 35661000 (+)
G1286518 NA non-coding downstream 11346 35671610 ~ 35672450 (+)
G1286525 NA non-coding downstream 16925 35677189 ~ 35677462 (+)
G1286526 NA non-coding downstream 17614 35677878 ~ 35678277 (+)
G1286533 NA non-coding downstream 24023 35684287 ~ 35684555 (+)
G1284354 NA other upstream 1547677 34111807 ~ 34112271 (+)
G1282302 NA other upstream 2961912 32687558 ~ 32698036 (+)
G1281462 NA other upstream 3663435 31996167 ~ 31996513 (+)
G1279833 NA other upstream 4712618 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 5251931 30395817 ~ 30416375 (+)
G1286648 LOC106590042 other downstream 375319 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 848814 36509078 ~ 36510512 (+)
G1289491 NA other downstream 2523172 38183436 ~ 38184003 (+)
G1289710 NA other downstream 2934616 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 3376741 39037005 ~ 39061248 (+)

Expression


Co-expression Network