Gene
RNA
| Item | Value |
|---|---|
| gene id | G1286533 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 35684287 ~ 35684555 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1468536 | True | 269 | lncRNA | 0.51 | 1 | 35684287 | 35684555 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938916 | NA | coding | upstream | 64767 | 35616824 ~ 35619520 (+) |
| LOC110490018 | LOC106578564 | coding | upstream | 322948 | 34992423 ~ 35361339 (+) |
| LOC110490017 | LOC106590053 | coding | upstream | 862272 | 34623914 ~ 34822015 (+) |
| LOC110490016 | LOC106590054 | coding | upstream | 1358377 | 34277021 ~ 34325910 (+) |
| LOC110490956 | drosha | coding | upstream | 2422243 | 33099881 ~ 33262044 (+) |
| LOC110490019 | LOC106578561 | coding | downstream | 51827 | 35736382 ~ 35815615 (+) |
| LOC110490020 | LOC106590040 | coding | downstream | 163331 | 35847886 ~ 35895107 (+) |
| LOC110490021 | LOC106590041 | coding | downstream | 212719 | 35897274 ~ 35988249 (+) |
| LOC110490024 | LOC106590043 | coding | downstream | 481952 | 36166507 ~ 36264082 (+) |
| LOC110490026 | m3k8 | coding | downstream | 938901 | 36616159 ~ 36635732 (+) |
| G1286526 | NA | non-coding | upstream | 6010 | 35677878 ~ 35678277 (+) |
| G1286525 | NA | non-coding | upstream | 6825 | 35677189 ~ 35677462 (+) |
| G1286518 | NA | non-coding | upstream | 11837 | 35671610 ~ 35672450 (+) |
| G1286508 | NA | non-coding | upstream | 23287 | 35660687 ~ 35661000 (+) |
| G1286507 | NA | non-coding | upstream | 24023 | 35659948 ~ 35660264 (+) |
| G1286552 | NA | non-coding | downstream | 19422 | 35703977 ~ 35704585 (+) |
| G1286563 | NA | non-coding | downstream | 27066 | 35711621 ~ 35712014 (+) |
| G1286564 | NA | non-coding | downstream | 28256 | 35712811 ~ 35713103 (+) |
| G1286624 | NA | non-coding | downstream | 146302 | 35830857 ~ 35932134 (+) |
| G1286651 | NA | non-coding | downstream | 311144 | 35995699 ~ 35996167 (+) |
| G1284354 | NA | other | upstream | 1572016 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 2986251 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 3687774 | 31996167 ~ 31996513 (+) |
| G1279833 | NA | other | upstream | 4736957 | 30944171 ~ 30947330 (+) |
| htr5ab | htr5a | other | upstream | 5276270 | 30395817 ~ 30416375 (+) |
| G1286648 | LOC106590042 | other | downstream | 351028 | 36035583 ~ 36093396 (+) |
| G1287489 | LOC106590045 | other | downstream | 824523 | 36509078 ~ 36510512 (+) |
| G1289491 | NA | other | downstream | 2498881 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 2910325 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 3352450 | 39037005 ~ 39061248 (+) |
