G1286624


Basic Information

Item Value
gene id G1286624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 35830857 ~ 35932134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1468629
tcacgatacatggccccattcattctttcctttacacggatcagtcgtcctggtccctttgcagaaaaacagccccaaagcatgatgtttccacccccatgcttcacattaggtatggtgttctttggatgcaactctttgtcctccaaacacgacgagttgagtttttaccaaaaagttatattttggtttcaactgaccatatgacattctcccaatcttcttctggatcatccaaatgcgctctagaaaacttcagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1468629 True 261 lncRNA 0.43 2 35830857 35932134

Neighbor

gene id symbol gene type direction distance location
LOC110490019 LOC106578561 coding upstream 15242 35736382 ~ 35815615 (+)
LOC118938916 NA coding upstream 211337 35616824 ~ 35619520 (+)
LOC110490018 LOC106578564 coding upstream 469518 34992423 ~ 35361339 (+)
LOC110490017 LOC106590053 coding upstream 1008842 34623914 ~ 34822015 (+)
LOC110490016 LOC106590054 coding upstream 1504947 34277021 ~ 34325910 (+)
LOC110490024 LOC106590043 coding downstream 234373 36166507 ~ 36264082 (+)
LOC110490026 m3k8 coding downstream 691322 36616159 ~ 36635732 (+)
LOC110490839 LOC106588460 coding downstream 872872 36805006 ~ 36805955 (+)
LOC110490032 cul2 coding downstream 937079 36869213 ~ 36902064 (+)
nrp1a LOC106590027 coding downstream 1915132 37847266 ~ 37960593 (+)
G1286564 NA non-coding upstream 117754 35712811 ~ 35713103 (+)
G1286563 NA non-coding upstream 118843 35711621 ~ 35712014 (+)
G1286552 NA non-coding upstream 126272 35703977 ~ 35704585 (+)
G1286533 NA non-coding upstream 146302 35684287 ~ 35684555 (+)
G1286526 NA non-coding upstream 152580 35677878 ~ 35678277 (+)
G1286651 NA non-coding downstream 63565 35995699 ~ 35996167 (+)
G1286648 LOC106590042 non-coding downstream 103449 36035583 ~ 36093396 (+)
G1287264 NA non-coding downstream 373824 36305958 ~ 36306184 (+)
G1287276 NA non-coding downstream 382184 36314318 ~ 36315509 (+)
G1284354 NA other upstream 1718586 34111807 ~ 34112271 (+)
G1282302 NA other upstream 3132821 32687558 ~ 32698036 (+)
G1281462 NA other upstream 3834344 31996167 ~ 31996513 (+)
G1279833 NA other upstream 4883527 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 5422840 30395817 ~ 30416375 (+)
G1287489 LOC106590045 other downstream 576944 36509078 ~ 36510512 (+)
G1289491 NA other downstream 2251302 38183436 ~ 38184003 (+)
G1289710 NA other downstream 2662746 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 3104871 39037005 ~ 39061248 (+)

Expression


Co-expression Network