G1286651


Basic Information

Item Value
gene id G1286651
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 35995699 ~ 35996167 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1468672
ATTAAATAaagaagtggcccaaggcagctTCCCTGtggtattccacagtttaacatatgaggggaagaaaatgaaccattgatataggtggactgtttcctgtcagttagattTGACTGTACCCTATTCAATGCTACCTCCTTAAAACCATACTGCATTAATTTTGTGAAAATCATTTaatgatccactaaatcaaatgctgcactgaaaactaaaaatagtacacccacaaacgtgccattatccatagcattgagccactggtcagtcatgtcaaccaatgcagtggtagtggaatggtttttgcgataagcatgctgattggctgtaatcagatcattcttttccatgtactcccatatttgtctactcacaataccctccaatatcttactgagtgTAAGGGAGTAGACTAATTGGTCGACTATTGGCAGGAGTAATGGGTTCTTTGCAGTCTTCTGGAATAGGA

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1468672 True 469 lncRNA 0.39 1 35995699 35996167

Neighbor

gene id symbol gene type direction distance location
LOC110490021 LOC106590041 coding upstream 7450 35897274 ~ 35988249 (+)
LOC110490020 LOC106590040 coding upstream 100592 35847886 ~ 35895107 (+)
LOC110490019 LOC106578561 coding upstream 180084 35736382 ~ 35815615 (+)
LOC118938916 NA coding upstream 376179 35616824 ~ 35619520 (+)
LOC110490018 LOC106578564 coding upstream 634360 34992423 ~ 35361339 (+)
LOC110490024 LOC106590043 coding downstream 170340 36166507 ~ 36264082 (+)
LOC110490026 m3k8 coding downstream 627289 36616159 ~ 36635732 (+)
LOC110490839 LOC106588460 coding downstream 808839 36805006 ~ 36805955 (+)
LOC110490032 cul2 coding downstream 873046 36869213 ~ 36902064 (+)
nrp1a LOC106590027 coding downstream 1851099 37847266 ~ 37960593 (+)
G1286624 NA non-coding upstream 63565 35830857 ~ 35932134 (+)
G1286564 NA non-coding upstream 282596 35712811 ~ 35713103 (+)
G1286563 NA non-coding upstream 283685 35711621 ~ 35712014 (+)
G1286552 NA non-coding upstream 291114 35703977 ~ 35704585 (+)
G1286533 NA non-coding upstream 311144 35684287 ~ 35684555 (+)
G1286648 LOC106590042 non-coding downstream 39416 36035583 ~ 36093396 (+)
G1287264 NA non-coding downstream 309791 36305958 ~ 36306184 (+)
G1287276 NA non-coding downstream 318151 36314318 ~ 36315509 (+)
G1287285 LOC106590044 non-coding downstream 328971 36325138 ~ 36328721 (+)
G1284354 NA other upstream 1883428 34111807 ~ 34112271 (+)
G1282302 NA other upstream 3297663 32687558 ~ 32698036 (+)
G1281462 NA other upstream 3999186 31996167 ~ 31996513 (+)
G1279833 NA other upstream 5048369 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 5587682 30395817 ~ 30416375 (+)
G1287489 LOC106590045 other downstream 512911 36509078 ~ 36510512 (+)
G1289491 NA other downstream 2187269 38183436 ~ 38184003 (+)
G1289710 NA other downstream 2598713 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 3040838 39037005 ~ 39061248 (+)

Expression


Co-expression Network