Gene
RNA
| Item | Value |
|---|---|
| gene id | G1287276 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 36314318 ~ 36315509 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1469332 | True | 1090 | lncRNA | 0.42 | 2 | 36314318 | 36315509 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490024 | LOC106590043 | coding | upstream | 50236 | 36166507 ~ 36264082 (+) |
| LOC110490021 | LOC106590041 | coding | upstream | 326069 | 35897274 ~ 35988249 (+) |
| LOC110490020 | LOC106590040 | coding | upstream | 419211 | 35847886 ~ 35895107 (+) |
| LOC110490019 | LOC106578561 | coding | upstream | 498703 | 35736382 ~ 35815615 (+) |
| LOC118938916 | NA | coding | upstream | 694798 | 35616824 ~ 35619520 (+) |
| LOC110490026 | m3k8 | coding | downstream | 307947 | 36616159 ~ 36635732 (+) |
| LOC110490839 | LOC106588460 | coding | downstream | 489497 | 36805006 ~ 36805955 (+) |
| LOC110490032 | cul2 | coding | downstream | 553704 | 36869213 ~ 36902064 (+) |
| nrp1a | LOC106590027 | coding | downstream | 1531757 | 37847266 ~ 37960593 (+) |
| LOC110490033 | LOC106590025 | coding | downstream | 1659213 | 37974722 ~ 38017988 (+) |
| G1287264 | NA | non-coding | upstream | 8134 | 36305958 ~ 36306184 (+) |
| G1286648 | LOC106590042 | non-coding | upstream | 273554 | 36035583 ~ 36093396 (+) |
| G1286651 | NA | non-coding | upstream | 318151 | 35995699 ~ 35996167 (+) |
| G1286624 | NA | non-coding | upstream | 382184 | 35830857 ~ 35932134 (+) |
| G1287285 | LOC106590044 | non-coding | downstream | 9629 | 36325138 ~ 36328721 (+) |
| G1287487 | NA | non-coding | downstream | 180971 | 36496480 ~ 36496682 (+) |
| G1287492 | NA | non-coding | downstream | 185092 | 36500601 ~ 36503020 (+) |
| G1287495 | LOC106590045 | non-coding | downstream | 199323 | 36514832 ~ 36515324 (+) |
| G1287504 | NA | non-coding | downstream | 217633 | 36533142 ~ 36533571 (+) |
| G1284354 | NA | other | upstream | 2202047 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 3616282 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 4317805 | 31996167 ~ 31996513 (+) |
| G1279833 | NA | other | upstream | 5366988 | 30944171 ~ 30947330 (+) |
| G1287489 | LOC106590045 | other | downstream | 193569 | 36509078 ~ 36510512 (+) |
| G1289491 | NA | other | downstream | 1867927 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 2279371 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 2721496 | 39037005 ~ 39061248 (+) |
| G1290614 | NA | other | downstream | 2810763 | 39126272 ~ 39127009 (+) |
