Gene
RNA
| Item | Value |
|---|---|
| gene id | G1287746 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 36829035 ~ 36829298 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1469870 | True | 264 | lncRNA | 0.30 | 1 | 36829035 | 36829298 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490839 | LOC106588460 | coding | upstream | 23080 | 36805006 ~ 36805955 (+) |
| LOC110490026 | m3k8 | coding | upstream | 193303 | 36616159 ~ 36635732 (+) |
| LOC110490024 | LOC106590043 | coding | upstream | 564953 | 36166507 ~ 36264082 (+) |
| LOC110490021 | LOC106590041 | coding | upstream | 840786 | 35897274 ~ 35988249 (+) |
| LOC110490020 | LOC106590040 | coding | upstream | 933928 | 35847886 ~ 35895107 (+) |
| LOC110490032 | cul2 | coding | downstream | 39915 | 36869213 ~ 36902064 (+) |
| nrp1a | LOC106590027 | coding | downstream | 1017968 | 37847266 ~ 37960593 (+) |
| LOC110490033 | LOC106590025 | coding | downstream | 1145424 | 37974722 ~ 38017988 (+) |
| LOC110490034 | rab18 | coding | downstream | 1188913 | 38018211 ~ 38038025 (+) |
| LOC110490038 | LOC106590019 | coding | downstream | 1664991 | 38494289 ~ 38568479 (+) |
| G1287656 | NA | non-coding | upstream | 47410 | 36775537 ~ 36781625 (+) |
| G1287651 | NA | non-coding | upstream | 63520 | 36762060 ~ 36765515 (+) |
| G1287652 | NA | non-coding | upstream | 64379 | 36762478 ~ 36764656 (+) |
| G1287535 | NA | non-coding | upstream | 248300 | 36580494 ~ 36580735 (+) |
| G1287764 | NA | non-coding | downstream | 14635 | 36843933 ~ 36844141 (+) |
| G1287781 | NA | non-coding | downstream | 39249 | 36868547 ~ 36868890 (+) |
| G1287790 | NA | non-coding | downstream | 65201 | 36894499 ~ 36894905 (+) |
| G1287795 | NA | non-coding | downstream | 81458 | 36910756 ~ 36911107 (+) |
| G1287891 | NA | non-coding | downstream | 125081 | 36954379 ~ 36954640 (+) |
| G1287489 | LOC106590045 | other | upstream | 318523 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 735639 | 36035583 ~ 36093396 (+) |
| G1284354 | NA | other | upstream | 2716764 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 4130999 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 4832522 | 31996167 ~ 31996513 (+) |
| G1289491 | NA | other | downstream | 1354138 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 1765582 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 2207707 | 39037005 ~ 39061248 (+) |
| G1290614 | NA | other | downstream | 2296974 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 3238260 | 40067558 ~ 40067907 (+) |
