G1287781


Basic Information

Item Value
gene id G1287781
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 36868547 ~ 36868890 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1469910
cttcaatagCTCTGcgatgttgctggatattggcgggaactggaacaagctgtcGTACACATAaatccagagcatctcaaacatgctcaatgggtgacatgtctggtgagtatgcaggccatggaagaactggtatGTTTtctgcttccaggaattgtgtacagattcttgtgacatggggccgtgcattatcatggtgaaacatgaggtgatggcggcggatgaacggcactacaatgggcctcaggatcttgtcacggtatctctgtgcattcaaatggcttactacatgattccatatgtgctatttcatcgatttggtgtcttcactattattctacaat

Function

NR:

description
hypothetical protein EH28_04398

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1469910 True 344 lncRNA 0.45 1 36868547 36868890

Neighbor

gene id symbol gene type direction distance location
LOC110490839 LOC106588460 coding upstream 62592 36805006 ~ 36805955 (+)
LOC110490026 m3k8 coding upstream 232815 36616159 ~ 36635732 (+)
LOC110490024 LOC106590043 coding upstream 604465 36166507 ~ 36264082 (+)
LOC110490021 LOC106590041 coding upstream 880298 35897274 ~ 35988249 (+)
LOC110490020 LOC106590040 coding upstream 973440 35847886 ~ 35895107 (+)
LOC110490032 cul2 coding downstream 323 36869213 ~ 36902064 (+)
nrp1a LOC106590027 coding downstream 978376 37847266 ~ 37960593 (+)
LOC110490033 LOC106590025 coding downstream 1105832 37974722 ~ 38017988 (+)
LOC110490034 rab18 coding downstream 1149321 38018211 ~ 38038025 (+)
LOC110490038 LOC106590019 coding downstream 1625399 38494289 ~ 38568479 (+)
G1287764 NA non-coding upstream 24406 36843933 ~ 36844141 (+)
G1287746 NA non-coding upstream 39249 36829035 ~ 36829298 (+)
G1287656 NA non-coding upstream 86922 36775537 ~ 36781625 (+)
G1287651 NA non-coding upstream 103032 36762060 ~ 36765515 (+)
G1287652 NA non-coding upstream 103891 36762478 ~ 36764656 (+)
G1287790 NA non-coding downstream 25609 36894499 ~ 36894905 (+)
G1287795 NA non-coding downstream 41866 36910756 ~ 36911107 (+)
G1287891 NA non-coding downstream 85489 36954379 ~ 36954640 (+)
G1288031 NA non-coding downstream 185706 37054596 ~ 37054801 (+)
G1288296 NA non-coding downstream 392129 37261019 ~ 37261726 (+)
G1287489 LOC106590045 other upstream 358035 36509078 ~ 36510512 (+)
G1286648 LOC106590042 other upstream 775151 36035583 ~ 36093396 (+)
G1284354 NA other upstream 2756276 34111807 ~ 34112271 (+)
G1282302 NA other upstream 4170511 32687558 ~ 32698036 (+)
G1281462 NA other upstream 4872034 31996167 ~ 31996513 (+)
G1289491 NA other downstream 1314546 38183436 ~ 38184003 (+)
G1289710 NA other downstream 1725990 38594880 ~ 38600241 (+)
G1290549 LOC106590036 other downstream 2168115 39037005 ~ 39061248 (+)
G1290614 NA other downstream 2257382 39126272 ~ 39127009 (+)
G1291464 NA other downstream 3198668 40067558 ~ 40067907 (+)

Expression


Co-expression Network